Detailed information NTG1090252

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACL1XL_RS03030
• Genome accession: NZ_CP178592
• Coordinates: 616546..617502 (+)
• Length: 318 a.a.
• NCBI ID: WP_409409258.1
• Uniprot ID: -
• Organism: Acidithiobacillus ferriphilus strain QBS1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 611546..622502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL1XL_RS03005 (ACL1XL_03005)	mutM	612156..612968 (+)	813	WP_409409260.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
ACL1XL_RS03010 (ACL1XL_03010)	-	612985..614964 (+)	1980	WP_409409259.1	dynamin family protein	-
ACL1XL_RS03015 (ACL1XL_03015)	-	614948..615199 (-)	252	WP_064219205.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACL1XL_RS03020 (ACL1XL_03020)	coaD	615229..615753 (-)	525	WP_064219204.1	pantetheine-phosphate adenylyltransferase	-
ACL1XL_RS03025 (ACL1XL_03025)	rsmD	615746..616315 (-)	570	WP_215860487.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACL1XL_RS03030 (ACL1XL_03030)	pilA	616546..617502 (+)	957	WP_409409258.1	signal recognition particle-docking protein FtsY	Machinery gene
ACL1XL_RS03035 (ACL1XL_03035)	ftsE	617499..618170 (+)	672	WP_064219201.1	cell division ATP-binding protein FtsE	-
ACL1XL_RS03040 (ACL1XL_03040)	ftsX	618167..619072 (+)	906	WP_215849236.1	permease-like cell division protein FtsX	-
ACL1XL_RS03045 (ACL1XL_03045)	rpoH	619147..619998 (+)	852	WP_215860485.1	RNA polymerase sigma factor RpoH	-
ACL1XL_RS03050 (ACL1XL_03050)	-	620004..620327 (+)	324	WP_229066453.1	hypothetical protein	-
ACL1XL_RS03055 (ACL1XL_03055)	hslU	620349..621671 (-)	1323	WP_215860484.1	ATP-dependent protease ATPase subunit HslU	-
ACL1XL_RS03060 (ACL1XL_03060)	hslV	621674..622213 (-)	540	WP_014028037.1	ATP-dependent protease subunit HslV	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 34182.22 Da
• Isoelectric Point: 7.4265

>NTDB_id=1090252 ACL1XL_RS03030 WP_409409258.1 616546..617502(+) (pilA) [Acidithiobacillus ferriphilus strain QBS1]
MPTEALSDTPGKGLFSRLRQGLTRSREQLVEGVGRLVRGKKVIDAELLEDLEALLLQADLGTAATREIMDSVAERVHRKE
LTDPNALQTALRESLLDILRPRAQPWSPEKGRSQVLLMVGINGAGKTTTIGKLAAHWKAEGFGIVLAAGDTFRAAAVEQL
QGWGKRVQVPVVAQGTGADSASVIFDALTTTRARGSELLIADTAGRLHTQGHLMEELKKIKRVLGKQDPEAPQQIWLVLD
AGTGQNALNQVRQFHDAIGLTGICITKLDGTAKGGVVAAIARAVPIPIRYIGVGEQVEDLRPFDPESFVDALFAESKS

Nucleotide

• Length: 957 bp

>NTDB_id=1090252 ACL1XL_RS03030 WP_409409258.1 616546..617502(+) (pilA) [Acidithiobacillus ferriphilus strain QBS1]
ATGCCGACAGAAGCCCTTTCCGATACACCCGGAAAAGGGCTTTTCTCCCGTCTTCGACAAGGCCTGACCCGAAGCCGGGA
ACAATTGGTCGAGGGCGTGGGGCGTCTGGTACGCGGTAAAAAGGTTATTGATGCGGAATTGCTGGAAGACCTGGAAGCCT
TACTGCTGCAAGCTGATCTGGGCACGGCTGCAACCCGGGAAATCATGGACAGCGTGGCGGAGCGGGTACATCGCAAGGAA
CTCACGGACCCCAACGCGCTCCAGACGGCGTTGCGCGAGTCACTCCTCGACATCCTGCGTCCCCGCGCGCAACCTTGGTC
GCCCGAGAAGGGGCGCTCCCAGGTATTGCTCATGGTGGGTATCAACGGCGCGGGTAAAACGACCACCATCGGTAAGCTGG
CTGCGCACTGGAAGGCGGAGGGTTTCGGTATTGTCCTCGCCGCCGGAGACACCTTCCGCGCCGCCGCCGTGGAGCAGTTA
CAGGGCTGGGGTAAACGGGTGCAGGTGCCCGTGGTGGCGCAGGGGACGGGCGCCGACAGCGCTTCCGTGATCTTTGATGC
GCTGACTACGACCCGCGCGCGCGGCAGCGAGTTGCTCATCGCCGATACCGCCGGACGCCTTCATACCCAGGGTCATCTCA
TGGAAGAATTGAAGAAGATCAAGCGGGTCCTTGGCAAACAGGACCCGGAGGCGCCACAACAGATCTGGCTGGTGCTGGAC
GCGGGCACCGGCCAGAATGCCCTTAATCAGGTGCGTCAGTTTCACGATGCGATAGGGTTGACGGGTATTTGCATCACCAA
GCTGGATGGCACCGCCAAAGGTGGCGTGGTGGCGGCCATTGCCAGGGCCGTGCCCATTCCCATTCGCTATATCGGTGTTG
GTGAGCAGGTCGAAGATCTACGTCCTTTTGACCCCGAATCTTTTGTCGATGCCCTTTTTGCGGAGTCGAAGTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-95)

• SRP54-type protein, GTPase domain (SRP54) (114-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.974	94.969	0.513