Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACJGE3_RS18300 Genome accession   NZ_CP178562
Coordinates   3704213..3705004 (+) Length   263 a.a.
NCBI ID   WP_003155502.1    Uniprot ID   A0A9Q3QM78
Organism   Bacillus velezensis strain JT-3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3699213..3710004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJGE3_RS18275 (ACJGE3_18275) - 3701208..3702092 (+) 885 WP_369614738.1 PhzF family phenazine biosynthesis isomerase -
  ACJGE3_RS18280 (ACJGE3_18280) - 3702169..3702753 (+) 585 WP_369614737.1 nitroreductase -
  ACJGE3_RS18285 (ACJGE3_18285) - 3702792..3702983 (-) 192 WP_003155508.1 YfhD family protein -
  ACJGE3_RS18290 (ACJGE3_18290) - 3703054..3703164 (-) 111 WP_003155504.1 YfhE family protein -
  ACJGE3_RS18295 (ACJGE3_18295) - 3703222..3704121 (-) 900 WP_369614736.1 TIGR01777 family oxidoreductase -
  ACJGE3_RS18300 (ACJGE3_18300) recX 3704213..3705004 (+) 792 WP_003155502.1 recombination regulator RecX Regulator
  ACJGE3_RS18305 (ACJGE3_18305) - 3705011..3705322 (+) 312 WP_146283705.1 YfhH family protein -
  ACJGE3_RS18310 (ACJGE3_18310) - 3705469..3706662 (+) 1194 WP_025650229.1 MFS transporter -
  ACJGE3_RS18315 (ACJGE3_18315) - 3706702..3707091 (-) 390 WP_146283704.1 DUF2606 family protein -
  ACJGE3_RS18320 (ACJGE3_18320) - 3707054..3707965 (-) 912 WP_003155497.1 trypsin-like serine peptidase -
  ACJGE3_RS18325 (ACJGE3_18325) - 3708110..3708262 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  ACJGE3_RS18330 (ACJGE3_18330) - 3708386..3708655 (+) 270 WP_369614735.1 YfhJ family protein -
  ACJGE3_RS18335 (ACJGE3_18335) - 3708787..3709314 (+) 528 WP_369614734.1 SH3 domain-containing protein -
  ACJGE3_RS18340 (ACJGE3_18340) - 3709400..3709735 (+) 336 WP_369614733.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30978.18 Da        Isoelectric Point: 6.2735

>NTDB_id=1090203 ACJGE3_RS18300 WP_003155502.1 3704213..3705004(+) (recX) [Bacillus velezensis strain JT-3]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1090203 ACJGE3_RS18300 WP_003155502.1 3704213..3705004(+) (recX) [Bacillus velezensis strain JT-3]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGTGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATATCGGATGCGGTCTGAAAAAGAAGTC
CGGGATCACCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGTAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment