Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACJGE3_RS16130 Genome accession   NZ_CP178562
Coordinates   3276995..3277948 (+) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain JT-3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3271995..3282948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJGE3_RS16105 (ACJGE3_16105) - 3272039..3273472 (+) 1434 WP_167859882.1 sensor histidine kinase -
  ACJGE3_RS16110 (ACJGE3_16110) rapC 3273625..3274773 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  ACJGE3_RS16115 (ACJGE3_16115) phrC 3274757..3274876 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACJGE3_RS16120 (ACJGE3_16120) - 3275026..3275136 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  ACJGE3_RS16125 (ACJGE3_16125) - 3275216..3276580 (-) 1365 WP_025649998.1 aspartate kinase -
  ACJGE3_RS16130 (ACJGE3_16130) ceuB 3276995..3277948 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  ACJGE3_RS16135 (ACJGE3_16135) - 3277938..3278885 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  ACJGE3_RS16140 (ACJGE3_16140) - 3278879..3279637 (+) 759 WP_022552588.1 ABC transporter ATP-binding protein -
  ACJGE3_RS16145 (ACJGE3_16145) - 3279659..3280603 (+) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  ACJGE3_RS16150 (ACJGE3_16150) - 3280645..3282069 (-) 1425 WP_015388705.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=1090201 ACJGE3_RS16130 WP_003156332.1 3276995..3277948(+) (ceuB) [Bacillus velezensis strain JT-3]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1090201 ACJGE3_RS16130 WP_003156332.1 3276995..3277948(+) (ceuB) [Bacillus velezensis strain JT-3]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment