Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACJGE3_RS01990 Genome accession   NZ_CP178562
Coordinates   366991..367455 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JT-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 361991..372455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJGE3_RS01970 (ACJGE3_01970) - 362471..364291 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  ACJGE3_RS01975 (ACJGE3_01975) - 364267..365486 (-) 1220 Protein_393 aminotransferase A -
  ACJGE3_RS01980 (ACJGE3_01980) - 365687..365848 (-) 162 WP_367069849.1 hypothetical protein -
  ACJGE3_RS01985 (ACJGE3_01985) cheV 366037..366948 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  ACJGE3_RS01990 (ACJGE3_01990) kre 366991..367455 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACJGE3_RS01995 (ACJGE3_01995) - 367578..368870 (-) 1293 WP_024085236.1 MFS transporter -
  ACJGE3_RS02000 (ACJGE3_02000) - 368946..369440 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  ACJGE3_RS02005 (ACJGE3_02005) - 369515..370378 (-) 864 WP_369614274.1 metallophosphoesterase -
  ACJGE3_RS02010 (ACJGE3_02010) fadH 370522..371286 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACJGE3_RS02015 (ACJGE3_02015) - 371397..371946 (+) 550 Protein_401 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1090143 ACJGE3_RS01990 WP_003154622.1 366991..367455(-) (kre) [Bacillus velezensis strain JT-3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1090143 ACJGE3_RS01990 WP_003154622.1 366991..367455(-) (kre) [Bacillus velezensis strain JT-3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment