Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACL211_RS04430 Genome accession   NZ_CP178524
Coordinates   959460..960506 (+) Length   348 a.a.
NCBI ID   WP_001830374.1    Uniprot ID   A0A0N1EGU4
Organism   Staphylococcus epidermidis strain X15T2     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 954460..965506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL211_RS04405 isaB 955602..956138 (+) 537 WP_001830372.1 immunodominant staphylococcal antigen IsaB family protein -
  ACL211_RS04410 - 956288..957274 (-) 987 WP_002457091.1 FUSC family protein -
  ACL211_RS04415 map 957448..958203 (+) 756 WP_001830397.1 type I methionyl aminopeptidase -
  ACL211_RS04420 - 958361..958747 (+) 387 WP_001830382.1 hypothetical protein -
  ACL211_RS04425 liaF 958762..959463 (+) 702 WP_002457093.1 cell wall-active antibiotics response protein LiaF -
  ACL211_RS04430 vraS 959460..960506 (+) 1047 WP_001830374.1 sensor histidine kinase Regulator
  ACL211_RS04435 vraR 960496..961125 (+) 630 WP_001830439.1 two-component system response regulator VraR Regulator
  ACL211_RS04440 - 961182..962360 (-) 1179 WP_001830411.1 YihY/virulence factor BrkB family protein -
  ACL211_RS04445 - 962767..963051 (-) 285 WP_001830401.1 YtxH domain-containing protein -
  ACL211_RS04450 - 963059..963523 (-) 465 WP_001830437.1 low molecular weight protein-tyrosine-phosphatase -
  ACL211_RS04455 - 963664..963879 (+) 216 WP_001830421.1 DUF1128 domain-containing protein -
  ACL211_RS04460 - 963881..965122 (+) 1242 WP_001832467.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40066.49 Da        Isoelectric Point: 5.8512

>NTDB_id=1089865 ACL211_RS04430 WP_001830374.1 959460..960506(+) (vraS) [Staphylococcus epidermidis strain X15T2]
MNHYIRAIGSMLILVYSMLIAFLFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNLLIVLLCIIVGSVLAYKINQQNDWIIS
QIERSIEGQTVGINDQNIELYTETIDIYHTLVPLNQELHRLRMKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESKLEPPLNQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFEVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQEDYLLLRIQDNGKGFNVDEKFEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEENSSGD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=1089865 ACL211_RS04430 WP_001830374.1 959460..960506(+) (vraS) [Staphylococcus epidermidis strain X15T2]
ATGAATCACTACATAAGAGCTATAGGCTCAATGCTTATATTAGTATATAGTATGCTTATTGCTTTTTTATTTATTGATAA
AGTGTTTGTAAATATTATCTTTTTTCAGGGGATGTTTTATACACAAATATTTGGAATACCTGTTTTTCTATTTTTAAATT
TATTAATTGTTCTTTTATGTATTATAGTTGGATCTGTTTTAGCTTATAAAATTAATCAACAAAATGATTGGATTATTTCA
CAAATAGAAAGATCAATAGAAGGACAAACAGTAGGTATCAATGATCAAAATATCGAATTATATACAGAAACGATAGATAT
TTATCATACACTAGTTCCATTAAATCAAGAATTACATCGACTTAGAATGAAGACTCAAAATTTAACTAATGAAAACTACA
ATATTAATGATGTAAAAGTCAAAAAGATTATCGAAGATGAGCGACAACGACTTGCCAGGGAATTACATGATTCTGTTAGT
CAACAATTATTTGCTGCGAGCATGATGCTATCGGCGATAAAAGAGTCGAAATTAGAACCACCTTTAAATCAACAGATACC
AATTCTTGAAAAAATGGTTCAAGACTCACAACTTGAAATGAGAGCTTTGTTATTACATTTAAGACCGATAGGTTTAAAAG
ATAAGTCTTTAGGTGAAGGAATTAAAGATTTAGTCATCGATTTACAAAAGAAAGTACCAATGAAAGTTGTGCATGAAATT
CAAGATTTTGAAGTGCCAAAAGGCATTGAAGATCACTTGTTCAGAATTACACAAGAAGCTATTTCAAATACATTGAGACA
TTCAAATGGTACAAAAGTAACTGTGGAATTATTTAATCAAGAGGATTATCTTTTACTAAGAATTCAAGATAATGGAAAAG
GGTTTAATGTAGATGAAAAATTTGAACAAAGTTATGGTTTGAAAAATATGCGAGAACGAGCGTTAGAAATTGGTGCGACG
TTTCATATTGTATCTTTACCTGATTCAGGTACACGAATTGAAGTTAAGGCACCATTGAATAAGGAGGAGAATTCAAGTGG
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0N1EGU4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

93.023

98.851

0.92


Multiple sequence alignment