Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACLZ2J_RS07755 Genome accession   NZ_CP178514
Coordinates   1472855..1473430 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS18-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467855..1478430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS07725 dapD 1468041..1468751 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACLZ2J_RS07730 dapI 1468821..1469945 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  ACLZ2J_RS07735 ykuS 1470007..1470252 (+) 246 WP_003232382.1 YkuS family protein -
  ACLZ2J_RS07740 mscT 1470289..1471092 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ACLZ2J_RS07745 ahpA 1471329..1471871 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACLZ2J_RS07750 ykuV 1471943..1472389 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  ACLZ2J_RS07755 rok 1472855..1473430 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACLZ2J_RS07760 cse15 1473471..1474436 (-) 966 WP_003245018.1 spore protein Cse15 -
  ACLZ2J_RS07765 mobA 1474573..1475172 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  ACLZ2J_RS07770 moeB 1475223..1476242 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACLZ2J_RS07775 glp 1476260..1477552 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  ACLZ2J_RS07780 mobB 1477513..1478034 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1089798 ACLZ2J_RS07755 WP_003232378.1 1472855..1473430(+) (rok) [Bacillus subtilis strain BS18-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1089798 ACLZ2J_RS07755 WP_003232378.1 1472855..1473430(+) (rok) [Bacillus subtilis strain BS18-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment