Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACLZ2J_RS07640 Genome accession   NZ_CP178514
Coordinates   1453630..1454094 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain BS18-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448630..1459094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS07620 kinA 1449096..1450916 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  ACLZ2J_RS07625 dapX 1450927..1452108 (-) 1182 WP_003232415.1 aminotransferase A -
  ACLZ2J_RS07630 - 1452310..1452471 (-) 162 WP_003245246.1 hypothetical protein -
  ACLZ2J_RS07635 cheV 1452675..1453586 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  ACLZ2J_RS07640 kre 1453630..1454094 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ACLZ2J_RS07645 ykuC 1454220..1455512 (-) 1293 WP_003245267.1 MFS transporter -
  ACLZ2J_RS07650 ltdD 1455588..1456082 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  ACLZ2J_RS07655 ppeE 1456139..1456999 (-) 861 WP_003232400.1 metallophosphoesterase -
  ACLZ2J_RS07660 fadH 1457142..1457906 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1089797 ACLZ2J_RS07640 WP_003232406.1 1453630..1454094(-) (kre) [Bacillus subtilis strain BS18-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1089797 ACLZ2J_RS07640 WP_003232406.1 1453630..1454094(-) (kre) [Bacillus subtilis strain BS18-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment