Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACLZ2J_RS06245 Genome accession   NZ_CP178514
Coordinates   1206965..1208116 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis strain BS18-1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1201965..1213116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS06210 yjbB 1202637..1203854 (+) 1218 WP_010886478.1 MFS transporter -
  ACLZ2J_RS06215 yjbC 1204018..1204596 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  ACLZ2J_RS06220 spx 1204777..1205172 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  ACLZ2J_RS06225 yjbE 1205215..1205871 (-) 657 WP_003232944.1 TerC family protein -
  ACLZ2J_RS06230 - 1206041..1206181 (+) 141 WP_119122854.1 hypothetical protein -
  ACLZ2J_RS06235 mecA 1206148..1206804 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  ACLZ2J_RS06240 - 1206799..1206921 (-) 123 WP_003245684.1 hypothetical protein -
  ACLZ2J_RS06245 coiA 1206965..1208116 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  ACLZ2J_RS06250 pepF 1208346..1210175 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  ACLZ2J_RS06255 - 1210213..1210380 (-) 168 WP_003244944.1 hypothetical protein -
  ACLZ2J_RS06260 spxH 1210694..1211593 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ACLZ2J_RS06265 bhbI 1211590..1211988 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACLZ2J_RS06270 cwlQ 1212243..1212977 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=1089793 ACLZ2J_RS06245 WP_003245839.1 1206965..1208116(+) (coiA) [Bacillus subtilis strain BS18-1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1089793 ACLZ2J_RS06245 WP_003245839.1 1206965..1208116(+) (coiA) [Bacillus subtilis strain BS18-1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment