Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ACLZ2J_RS06120 Genome accession   NZ_CP178514
Coordinates   1183708..1184661 (+) Length   317 a.a.
NCBI ID   WP_003245494.1    Uniprot ID   A0AAE2SG99
Organism   Bacillus subtilis strain BS18-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178708..1189661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS06095 argF 1180540..1181499 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  ACLZ2J_RS06100 yjzC 1181585..1181764 (+) 180 WP_003245356.1 YjzC family protein -
  ACLZ2J_RS06105 yjzD 1181810..1181995 (-) 186 WP_003245236.1 YjzD family protein -
  ACLZ2J_RS06110 - 1182244..1182978 (+) 735 WP_003245223.1 hypothetical protein -
  ACLZ2J_RS06115 - 1183060..1183617 (+) 558 WP_003232974.1 hypothetical protein -
  ACLZ2J_RS06120 med 1183708..1184661 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  ACLZ2J_RS06125 comZ 1184676..1184867 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACLZ2J_RS06130 yjzB 1184897..1185136 (-) 240 WP_003232972.1 spore coat protein YjzB -
  ACLZ2J_RS06135 fabH 1185301..1186239 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ACLZ2J_RS06140 fabF 1186262..1187503 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ACLZ2J_RS06145 yjaZ 1187579..1188364 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  ACLZ2J_RS06150 appD 1188556..1189542 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.80 Da        Isoelectric Point: 4.5457

>NTDB_id=1089788 ACLZ2J_RS06120 WP_003245494.1 1183708..1184661(+) (med) [Bacillus subtilis strain BS18-1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1089788 ACLZ2J_RS06120 WP_003245494.1 1183708..1184661(+) (med) [Bacillus subtilis strain BS18-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment