Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HW10_RS02190 | Genome accession | NZ_CP008856 |
| Coordinates | 453886..454251 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain F23197 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 448886..459251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW10_RS02160 (HW10_11240) | pyrR | 449508..450020 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HW10_RS02165 (HW10_11235) | ruvX | 450132..450566 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HW10_RS02170 (HW10_11230) | - | 450566..451135 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HW10_RS02175 (HW10_11225) | - | 451184..452077 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| HW10_RS02180 (HW10_11220) | gshB | 452224..453177 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HW10_RS02185 (HW10_11215) | pilG | 453432..453839 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HW10_RS02190 (HW10_11210) | pilH | 453886..454251 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HW10_RS02195 (HW10_11205) | - | 454302..454838 (+) | 537 | WP_059303227.1 | chemotaxis protein CheW | - |
| HW10_RS02200 (HW10_11200) | pilJ | 454923..456971 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HW10_RS02205 (HW10_11195) | pilK | 457032..457907 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=108975 HW10_RS02190 WP_003084587.1 453886..454251(+) (pilH) [Pseudomonas aeruginosa strain F23197]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=108975 HW10_RS02190 WP_003084587.1 453886..454251(+) (pilH) [Pseudomonas aeruginosa strain F23197]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |