Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACLWNE_RS11140 | Genome accession | NZ_CP178485 |
| Coordinates | 2107274..2107582 (+) | Length | 102 a.a. |
| NCBI ID | WP_339955886.1 | Uniprot ID | - |
| Organism | Thermus oshimai strain Blanco | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2102274..2112582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLWNE_RS11105 (ACLWNE_11105) | - | 2102742..2103200 (+) | 459 | WP_339955872.1 | hypothetical protein | - |
| ACLWNE_RS11110 (ACLWNE_11110) | pfkA | 2103197..2104165 (-) | 969 | WP_339955871.1 | 6-phosphofructokinase | - |
| ACLWNE_RS11115 (ACLWNE_11115) | rsmI | 2104162..2104950 (-) | 789 | WP_016330360.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACLWNE_RS11120 (ACLWNE_11120) | - | 2104952..2105443 (-) | 492 | WP_016330361.1 | hypothetical protein | - |
| ACLWNE_RS11125 (ACLWNE_11125) | - | 2105485..2106012 (-) | 528 | WP_016330362.1 | inorganic diphosphatase | - |
| ACLWNE_RS11130 (ACLWNE_11130) | - | 2106023..2106655 (-) | 633 | WP_016330363.1 | glycerophosphodiester phosphodiesterase | - |
| ACLWNE_RS11135 (ACLWNE_11135) | - | 2106678..2107301 (+) | 624 | WP_016330364.1 | hypothetical protein | - |
| ACLWNE_RS11140 (ACLWNE_11140) | comEA | 2107274..2107582 (+) | 309 | WP_339955886.1 | ComEA family DNA-binding protein | Machinery gene |
| ACLWNE_RS11145 (ACLWNE_11145) | - | 2107579..2109599 (+) | 2021 | Protein_2171 | ComEC/Rec2 family competence protein | - |
| ACLWNE_RS11150 (ACLWNE_11150) | - | 2109587..2110390 (-) | 804 | WP_339955869.1 | ParB/RepB/Spo0J family partition protein | - |
| ACLWNE_RS11155 (ACLWNE_11155) | soj | 2110374..2111123 (-) | 750 | WP_413217233.1 | chromosome-partitioning ATPase Soj | - |
| ACLWNE_RS11160 (ACLWNE_11160) | rsmG | 2111117..2111845 (-) | 729 | WP_413217234.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11183.32 Da Isoelectric Point: 10.1804
>NTDB_id=1089711 ACLWNE_RS11140 WP_339955886.1 2107274..2107582(+) (comEA) [Thermus oshimai strain Blanco]
MVRLYLLAVALLGLSALWPKVFPHPAPVRVEALGKVAFTPPPPAPVSLNEASYEELLALPGVGPALAQRILEGRPYREVE
DLLRVKGIGPKTLERLRPYVRP
MVRLYLLAVALLGLSALWPKVFPHPAPVRVEALGKVAFTPPPPAPVSLNEASYEELLALPGVGPALAQRILEGRPYREVE
DLLRVKGIGPKTLERLRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=1089711 ACLWNE_RS11140 WP_339955886.1 2107274..2107582(+) (comEA) [Thermus oshimai strain Blanco]
CTGGTCCGCCTCTACCTCCTCGCGGTAGCCCTCCTGGGCCTTTCAGCCCTCTGGCCCAAGGTCTTCCCCCATCCCGCCCC
CGTGCGGGTGGAGGCCCTGGGGAAGGTGGCTTTCACCCCCCCTCCCCCCGCCCCGGTGAGCCTCAACGAGGCCAGCTACG
AGGAGCTCCTGGCCCTGCCCGGGGTGGGGCCCGCCCTGGCCCAGAGGATCCTGGAGGGCCGCCCCTACCGAGAGGTGGAG
GACCTCCTCCGGGTGAAGGGGATCGGCCCCAAGACCCTGGAGCGGCTTAGGCCCTACGTGCGGCCATGA
CTGGTCCGCCTCTACCTCCTCGCGGTAGCCCTCCTGGGCCTTTCAGCCCTCTGGCCCAAGGTCTTCCCCCATCCCGCCCC
CGTGCGGGTGGAGGCCCTGGGGAAGGTGGCTTTCACCCCCCCTCCCCCCGCCCCGGTGAGCCTCAACGAGGCCAGCTACG
AGGAGCTCCTGGCCCTGCCCGGGGTGGGGCCCGCCCTGGCCCAGAGGATCCTGGAGGGCCGCCCCTACCGAGAGGTGGAG
GACCTCCTCCGGGTGAAGGGGATCGGCCCCAAGACCCTGGAGCGGCTTAGGCCCTACGTGCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
75.294 |
83.333 |
0.627 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.167 |
100 |
0.461 |