Detailed information NTG1089405

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: ACLRDL_RS14835
• Genome accession: NZ_CP178388
• Coordinates: 348786..351359 (+)
• Length: 857 a.a.
• NCBI ID: WP_001026304.1
• Uniprot ID: -
• Organism: Vibrio cholerae isolate CTMA_1842
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 343786..356359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLRDL_RS14800 (ACLRDL_14800)	-	343834..344085 (-)	252	WP_001882582.1	YgjV family protein	-
ACLRDL_RS14805 (ACLRDL_14805)	-	344498..344818 (-)	321	WP_001089529.1	DUF496 family protein	-
ACLRDL_RS14810 (ACLRDL_14810)	-	345006..345203 (+)	198	WP_001246069.1	hypothetical protein	-
ACLRDL_RS14815 (ACLRDL_14815)	-	345245..345895 (+)	651	WP_001025630.1	YceH family protein	-
ACLRDL_RS14820 (ACLRDL_14820)	-	345895..346200 (+)	306	WP_000448828.1	GIY-YIG nuclease family protein	-
ACLRDL_RS14825 (ACLRDL_14825)	traF	346302..347462 (+)	1161	WP_001025858.1	conjugal transfer protein TraF	-
ACLRDL_RS14830 (ACLRDL_14830)	luxP	347674..348768 (+)	1095	WP_000823673.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
ACLRDL_RS14835 (ACLRDL_14835)	luxQ	348786..351359 (+)	2574	WP_001026304.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
ACLRDL_RS14840 (ACLRDL_14840)	-	351351..352016 (-)	666	WP_000268198.1	PilZ domain-containing protein	-
ACLRDL_RS14845 (ACLRDL_14845)	-	352260..352778 (-)	519	WP_000914960.1	hypothetical protein	-
ACLRDL_RS14850 (ACLRDL_14850)	-	353022..353420 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
ACLRDL_RS14855 (ACLRDL_14855)	-	353622..353927 (+)	306	WP_001181133.1	hypothetical protein	-
ACLRDL_RS14860 (ACLRDL_14860)	-	354276..356012 (+)	1737	WP_000701000.1	ATP-dependent nuclease	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96973.83 Da
• Isoelectric Point: 6.0964

>NTDB_id=1089405 ACLRDL_RS14835 WP_001026304.1 348786..351359(+) (luxQ) [Vibrio cholerae isolate CTMA_1842]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTPS
EGKSVHILMRRSSLIEAGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAK
DAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIGVSIASRWWLQKRIQREIETLMNYTHK
LMDLDTKSEFIGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITKAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGISTRFEIQLPIELVEKPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=1089405 ACLRDL_RS14835 WP_001026304.1 348786..351359(+) (luxQ) [Vibrio cholerae isolate CTMA_1842]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCTTTTATCACCCATGCTGTGGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGGCTCAAGAAGGACAACGCACTTCAG
TTCAAACCTCTAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAG
AACGCCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGCTGGATGAATTCTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACG
GCATTGCCCAGCAAGAGCTGAATAAGCTTATCCGCAGAGTGGCGATCAGTGGCAATTGGCACTTGGTTCAAACGCCCAGC
GAGGGCAAATCAGTCCATATTTTGATGCGTCGTTCATCACTGATTGAAGCGGGAACCGGGCAGGTTGTTGGGTATCTGTA
TGTAGGCATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTCCTTG
CCGTGGATACTACGCCGCTGGTTTCTACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGCGCCAAA
GATGCTATGCGCGACAGCTTTATTGTTGGGCAAACCTTCTTAGAAGTGGAAAGTGTACCGACCTATCTGTGCGTCTACTC
AATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGATCAGTATGATCG
GTGTTTCCATAGCGTCACGCTGGTGGCTACAAAAACGCATTCAGCGTGAAATTGAAACCTTGATGAATTACACCCATAAA
TTGATGGATCTCGATACGAAAAGTGAGTTTATTGGTTCAAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAATCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTACCGACCATCACCAAGGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCACCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAGGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAGCAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGTCATGAATTGCGCACGCCGCTCAATGGTGTGCTCGGTGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGATGAACAGCGCGAACACGTTGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCAGTGCTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGTTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTAATGAAAAAGGCTTGGAACTGGTGGTGAATTCCAATATCACCACCGCAGC
GATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCTTTAGCTCAACTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATCCGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAAGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGCGGTTTAGGCTTAACGATTGTGCACAGCTTAGTGGAAATGCTCAGTGGTCAACTGCACGTCAGCTCCGAGTATGGCA
TTAGTACACGTTTTGAAATTCAGCTACCGATTGAGCTGGTAGAAAAACCGGATGCGCCGCAGCAGTTGTTACCGGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGTTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCGCACCATCAAAAAAGTACTGCAC
CTTCCGGTGGTGGTGTATGCCTGCACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTGTTAGTGAAGCCACTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAACATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	99.767	100	0.998