Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   GT95_RS07230 Genome accession   NZ_CP008813
Coordinates   1378532..1378972 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain C001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373532..1383972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT95_RS07215 (GT95_07010) - 1374190..1374816 (-) 627 WP_000449638.1 GTP pyrophosphokinase family protein -
  GT95_RS07220 (GT95_07015) rcrQ 1374924..1376678 (-) 1755 WP_000851086.1 ABC transporter ATP-binding protein Regulator
  GT95_RS07225 (GT95_07020) rcrP 1376668..1378485 (-) 1818 WP_000481824.1 ABC transporter ATP-binding protein Regulator
  GT95_RS07230 (GT95_07025) rcrR 1378532..1378972 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  GT95_RS07235 (GT95_07030) - 1379240..1381312 (+) 2073 WP_000726925.1 bifunctional metallophosphatase/5'-nucleotidase -
  GT95_RS07240 (GT95_07035) - 1381349..1381759 (-) 411 WP_069107321.1 peptide deformylase -
  GT95_RS07245 (GT95_07040) gdhA 1381829..1383178 (-) 1350 WP_000200443.1 NADP-specific glutamate dehydrogenase -
  GT95_RS07250 (GT95_07045) - 1383346..1383855 (+) 510 WP_000870953.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=108935 GT95_RS07230 WP_000431168.1 1378532..1378972(-) (rcrR) [Streptococcus agalactiae strain C001]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=108935 GT95_RS07230 WP_000431168.1 1378532..1378972(-) (rcrR) [Streptococcus agalactiae strain C001]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment