Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACLOAX_RS04610 | Genome accession | NZ_CP178386 |
| Coordinates | 955674..956054 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain RP15 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 950674..961054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLOAX_RS04580 (ACLOAX_04580) | kdsB | 951577..952338 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACLOAX_RS04585 (ACLOAX_04585) | - | 952350..953330 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACLOAX_RS04590 (ACLOAX_04590) | - | 953342..953683 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACLOAX_RS04595 (ACLOAX_04595) | - | 953701..954474 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACLOAX_RS04600 (ACLOAX_04600) | - | 954512..955120 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACLOAX_RS04605 (ACLOAX_04605) | - | 955130..955684 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACLOAX_RS04610 (ACLOAX_04610) | xcpV | 955674..956054 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACLOAX_RS04615 (ACLOAX_04615) | xcpW | 956054..956755 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACLOAX_RS04620 (ACLOAX_04620) | gspK | 956755..957714 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACLOAX_RS04625 (ACLOAX_04625) | - | 957945..958541 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACLOAX_RS04630 (ACLOAX_04630) | ung | 958592..959305 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACLOAX_RS04635 (ACLOAX_04635) | - | 959302..960426 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACLOAX_RS04640 (ACLOAX_04640) | tadA | 960433..960936 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1089324 ACLOAX_RS04610 WP_000836911.1 955674..956054(+) (xcpV) [Acinetobacter baumannii strain RP15]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1089324 ACLOAX_RS04610 WP_000836911.1 955674..956054(+) (xcpV) [Acinetobacter baumannii strain RP15]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |