Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACLSIV_RS09050 | Genome accession | NZ_CP178385 |
| Coordinates | 1835033..1837477 (-) | Length | 814 a.a. |
| NCBI ID | WP_096039507.1 | Uniprot ID | A0A290PWR0 |
| Organism | Lactococcus raffinolactis strain GCULR | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1830033..1842477
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLSIV_RS09030 (ACLSIV_09030) | - | 1830673..1831587 (-) | 915 | WP_061774871.1 | magnesium transporter CorA family protein | - |
| ACLSIV_RS09035 (ACLSIV_09035) | - | 1831611..1832735 (-) | 1125 | WP_096039505.1 | VanZ family protein | - |
| ACLSIV_RS09040 (ACLSIV_09040) | eno | 1832835..1834160 (-) | 1326 | WP_061774869.1 | phosphopyruvate hydratase | - |
| ACLSIV_RS09045 (ACLSIV_09045) | hpf | 1834391..1834942 (-) | 552 | WP_096039506.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| ACLSIV_RS09050 (ACLSIV_09050) | clpC | 1835033..1837477 (-) | 2445 | WP_096039507.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ACLSIV_RS09055 (ACLSIV_09055) | - | 1837506..1837970 (-) | 465 | WP_167372298.1 | CtsR family transcriptional regulator | - |
| ACLSIV_RS09060 (ACLSIV_09060) | - | 1838336..1839037 (+) | 702 | WP_061774866.1 | XRE family transcriptional regulator | - |
| ACLSIV_RS09065 (ACLSIV_09065) | - | 1839084..1840529 (+) | 1446 | WP_096039508.1 | Y-family DNA polymerase | - |
| ACLSIV_RS09070 (ACLSIV_09070) | - | 1840526..1840696 (+) | 171 | WP_167372299.1 | hypothetical protein | - |
| ACLSIV_RS09075 (ACLSIV_09075) | - | 1840732..1841133 (+) | 402 | WP_096039509.1 | YbgA family protein | - |
| ACLSIV_RS09080 (ACLSIV_09080) | - | 1841117..1841479 (+) | 363 | WP_061774863.1 | TIGR02328 family protein | - |
| ACLSIV_RS09085 (ACLSIV_09085) | greA | 1841568..1842050 (-) | 483 | WP_003140218.1 | transcription elongation factor GreA | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 89669.50 Da Isoelectric Point: 5.6559
>NTDB_id=1089308 ACLSIV_RS09050 WP_096039507.1 1835033..1837477(-) (clpC) [Lactococcus raffinolactis strain GCULR]
MTQNYTHILEDILKTARVFAAGNGYDYAETSHVLAGMLSSNDSFGQNILTDHDVTIEMALDEIEQHQLPEKMQTVQNIQF
SPKVEQLLLEADALAAQNHLAETGSEHLLYVILTDDDNVAKKLLELNKIKITEIVKDLIELGNMNVKKIAKKAVTPMGKR
DIASGVAATSITPTLDSVARDVTEDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRMIDG
NIPANMQGVRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFQLIGATTFNEYQKYIEKDAALERRFAKVTVEEPSSDESIVILQGLQSKFEAFHQVNFDADAVKAAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKISAKNNLSEQSKLDKKASQLDEQLQEAIINQDFVLAKSLNKDLQKLEAKREKLTVKTKSSRVSE
GDVFAVVSNLTGVPVTQMSQSEMTRLINLEKELHKRVIGQSEAVTAVASAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDENSMIRIDMSEYMEKFNTSRLVGAPPGYVGYDEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATSLRDDKTVGFGAANASTDYVAMKSRILEELKKRYRPEFLNRIDESIVFHP
LSEQELSDIVKIMAKPLIKRLAERHITLKLSATAYQLIAKNGFEPEYGARPIRKALEKKLENPLSDKILSGEIKAGNSVT
VGVSKGELTIKVID
MTQNYTHILEDILKTARVFAAGNGYDYAETSHVLAGMLSSNDSFGQNILTDHDVTIEMALDEIEQHQLPEKMQTVQNIQF
SPKVEQLLLEADALAAQNHLAETGSEHLLYVILTDDDNVAKKLLELNKIKITEIVKDLIELGNMNVKKIAKKAVTPMGKR
DIASGVAATSITPTLDSVARDVTEDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRMIDG
NIPANMQGVRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFQLIGATTFNEYQKYIEKDAALERRFAKVTVEEPSSDESIVILQGLQSKFEAFHQVNFDADAVKAAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKISAKNNLSEQSKLDKKASQLDEQLQEAIINQDFVLAKSLNKDLQKLEAKREKLTVKTKSSRVSE
GDVFAVVSNLTGVPVTQMSQSEMTRLINLEKELHKRVIGQSEAVTAVASAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDENSMIRIDMSEYMEKFNTSRLVGAPPGYVGYDEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATSLRDDKTVGFGAANASTDYVAMKSRILEELKKRYRPEFLNRIDESIVFHP
LSEQELSDIVKIMAKPLIKRLAERHITLKLSATAYQLIAKNGFEPEYGARPIRKALEKKLENPLSDKILSGEIKAGNSVT
VGVSKGELTIKVID
Nucleotide
Download Length: 2445 bp
>NTDB_id=1089308 ACLSIV_RS09050 WP_096039507.1 1835033..1837477(-) (clpC) [Lactococcus raffinolactis strain GCULR]
ATGACACAAAATTATACGCACATACTTGAAGATATTCTCAAAACAGCTCGCGTTTTTGCGGCGGGCAATGGTTATGATTA
TGCAGAAACATCACACGTCTTGGCGGGGATGTTATCGAGTAACGATAGCTTTGGCCAAAACATTCTAACGGATCACGATG
TGACGATTGAAATGGCGCTAGATGAAATCGAACAACACCAGTTACCCGAAAAAATGCAAACGGTTCAAAATATCCAATTT
TCACCTAAGGTCGAACAGCTCTTGCTTGAAGCAGATGCACTTGCAGCTCAAAATCATTTGGCAGAAACAGGGTCTGAACA
CTTGCTCTATGTCATCTTGACTGATGATGACAATGTTGCCAAGAAACTTTTGGAACTAAACAAAATCAAAATTACTGAAA
TCGTTAAAGACTTAATTGAGCTCGGTAATATGAATGTGAAAAAAATAGCTAAAAAAGCGGTCACACCGATGGGAAAACGA
GATATCGCATCGGGTGTTGCGGCGACAAGTATTACGCCAACGCTAGATTCAGTGGCGCGTGATGTGACAGAAGATGCCAG
ACAAGGGCGCATTGACCCGATGATTGGGCGTGATAAGGAAATTGAGCGCGTGATTCACATTTTGAGTCGTCGCACGAAAA
ATAATCCTGTCCTCGTTGGCGAACCAGGTGTTGGTAAATCTGCCATTATCGAAGGCTTGGCACAACGCATGATTGATGGT
AACATCCCTGCCAATATGCAAGGTGTGCGTCTTATGTCACTTAATATCGCTAATGTCGTTGCCGGTACTAAATTCCGCGG
AGAATTTGAAGACCGGATGACTGCGATTGTTGATGAAGTCAGCCAAGATGCTAACACTATCGTGTTTGTTGATGAGCTCC
ATACTATCGTCGGTGCTGGTGGCGGAACGGATTCTGTTACCGATGCCTCAAACATTATGAAACCTGCACTAGCTCGTGGT
GAGTTTCAGCTGATTGGCGCAACGACCTTTAACGAATACCAAAAATACATCGAAAAAGATGCTGCTCTGGAACGTCGCTT
TGCAAAAGTTACTGTTGAAGAGCCATCTTCAGACGAATCGATTGTAATTCTACAAGGTCTTCAAAGCAAATTTGAAGCCT
TTCATCAGGTAAATTTTGACGCTGATGCAGTCAAGGCAGCGGTTCAGCTCAGTGTTCGCTATATGCCAAGTCGCAGACTG
CCGGATAAGGCCATTGACTTACTCGATGAAGCAGCTGCTGCCGTTAAAATTTCAGCTAAAAATAATTTATCCGAACAAAG
TAAGCTAGATAAAAAAGCATCACAGCTTGATGAACAGTTACAAGAAGCGATTATCAATCAAGATTTTGTGCTAGCTAAAA
GCTTAAACAAAGATCTTCAAAAACTTGAAGCCAAACGTGAGAAACTAACGGTTAAAACAAAGTCGTCTCGTGTGAGCGAA
GGTGATGTCTTTGCGGTTGTGTCTAACTTGACTGGCGTGCCTGTCACACAGATGAGCCAAAGTGAGATGACGCGTTTGAT
TAACTTAGAAAAAGAACTCCATAAACGCGTTATCGGTCAAAGCGAAGCCGTTACAGCTGTTGCTAGTGCTATCCGTCGTA
GTCGTTCAGGCATCTCAGATGACAGACGTCCTATGGGTTCCTTCATGTTCTTGGGGCCTACCGGTGTCGGGAAGACAGAG
CTTGCTAAAGCTCTGGCAGAGACCGTTTTCGGCGATGAAAACAGCATGATTCGTATCGATATGAGCGAATATATGGAGAA
ATTTAACACCAGTCGTTTAGTTGGAGCACCTCCTGGCTATGTTGGCTATGACGAGGGCGGTCAGCTAACCGAGCAGGTGC
GCAACAAGCCTTATGCTGTCGTCCTATTTGACGAGGCTGAGAAAGCCCATCCGGATGTCTTTAACCTCCTGCTCCAAATC
CTTGATGACGGCTTCATCACGGATGGTAAGGGGCGCAAGGTAGACTTCCGCAACACAATCATCATCATGACCAGTAACTT
GGGTGCGACCTCATTACGCGACGATAAGACGGTCGGATTTGGTGCAGCCAATGCCTCAACCGACTACGTCGCCATGAAGT
CTAGAATTTTAGAAGAGTTGAAAAAACGGTATCGCCCAGAGTTTCTCAACCGTATCGATGAAAGCATTGTTTTCCACCCA
CTTTCTGAGCAGGAATTATCAGATATCGTAAAAATCATGGCTAAACCATTGATTAAACGTTTGGCAGAACGTCACATCAC
CTTGAAACTTTCTGCCACTGCCTATCAGCTTATCGCTAAAAATGGCTTTGAACCAGAATATGGGGCCCGTCCAATCAGAA
AAGCTTTGGAGAAAAAACTTGAGAATCCTCTGTCGGATAAAATTTTGTCAGGCGAAATTAAGGCTGGAAATAGTGTGACA
GTAGGCGTTTCCAAAGGTGAGTTGACAATCAAAGTTATTGATTAA
ATGACACAAAATTATACGCACATACTTGAAGATATTCTCAAAACAGCTCGCGTTTTTGCGGCGGGCAATGGTTATGATTA
TGCAGAAACATCACACGTCTTGGCGGGGATGTTATCGAGTAACGATAGCTTTGGCCAAAACATTCTAACGGATCACGATG
TGACGATTGAAATGGCGCTAGATGAAATCGAACAACACCAGTTACCCGAAAAAATGCAAACGGTTCAAAATATCCAATTT
TCACCTAAGGTCGAACAGCTCTTGCTTGAAGCAGATGCACTTGCAGCTCAAAATCATTTGGCAGAAACAGGGTCTGAACA
CTTGCTCTATGTCATCTTGACTGATGATGACAATGTTGCCAAGAAACTTTTGGAACTAAACAAAATCAAAATTACTGAAA
TCGTTAAAGACTTAATTGAGCTCGGTAATATGAATGTGAAAAAAATAGCTAAAAAAGCGGTCACACCGATGGGAAAACGA
GATATCGCATCGGGTGTTGCGGCGACAAGTATTACGCCAACGCTAGATTCAGTGGCGCGTGATGTGACAGAAGATGCCAG
ACAAGGGCGCATTGACCCGATGATTGGGCGTGATAAGGAAATTGAGCGCGTGATTCACATTTTGAGTCGTCGCACGAAAA
ATAATCCTGTCCTCGTTGGCGAACCAGGTGTTGGTAAATCTGCCATTATCGAAGGCTTGGCACAACGCATGATTGATGGT
AACATCCCTGCCAATATGCAAGGTGTGCGTCTTATGTCACTTAATATCGCTAATGTCGTTGCCGGTACTAAATTCCGCGG
AGAATTTGAAGACCGGATGACTGCGATTGTTGATGAAGTCAGCCAAGATGCTAACACTATCGTGTTTGTTGATGAGCTCC
ATACTATCGTCGGTGCTGGTGGCGGAACGGATTCTGTTACCGATGCCTCAAACATTATGAAACCTGCACTAGCTCGTGGT
GAGTTTCAGCTGATTGGCGCAACGACCTTTAACGAATACCAAAAATACATCGAAAAAGATGCTGCTCTGGAACGTCGCTT
TGCAAAAGTTACTGTTGAAGAGCCATCTTCAGACGAATCGATTGTAATTCTACAAGGTCTTCAAAGCAAATTTGAAGCCT
TTCATCAGGTAAATTTTGACGCTGATGCAGTCAAGGCAGCGGTTCAGCTCAGTGTTCGCTATATGCCAAGTCGCAGACTG
CCGGATAAGGCCATTGACTTACTCGATGAAGCAGCTGCTGCCGTTAAAATTTCAGCTAAAAATAATTTATCCGAACAAAG
TAAGCTAGATAAAAAAGCATCACAGCTTGATGAACAGTTACAAGAAGCGATTATCAATCAAGATTTTGTGCTAGCTAAAA
GCTTAAACAAAGATCTTCAAAAACTTGAAGCCAAACGTGAGAAACTAACGGTTAAAACAAAGTCGTCTCGTGTGAGCGAA
GGTGATGTCTTTGCGGTTGTGTCTAACTTGACTGGCGTGCCTGTCACACAGATGAGCCAAAGTGAGATGACGCGTTTGAT
TAACTTAGAAAAAGAACTCCATAAACGCGTTATCGGTCAAAGCGAAGCCGTTACAGCTGTTGCTAGTGCTATCCGTCGTA
GTCGTTCAGGCATCTCAGATGACAGACGTCCTATGGGTTCCTTCATGTTCTTGGGGCCTACCGGTGTCGGGAAGACAGAG
CTTGCTAAAGCTCTGGCAGAGACCGTTTTCGGCGATGAAAACAGCATGATTCGTATCGATATGAGCGAATATATGGAGAA
ATTTAACACCAGTCGTTTAGTTGGAGCACCTCCTGGCTATGTTGGCTATGACGAGGGCGGTCAGCTAACCGAGCAGGTGC
GCAACAAGCCTTATGCTGTCGTCCTATTTGACGAGGCTGAGAAAGCCCATCCGGATGTCTTTAACCTCCTGCTCCAAATC
CTTGATGACGGCTTCATCACGGATGGTAAGGGGCGCAAGGTAGACTTCCGCAACACAATCATCATCATGACCAGTAACTT
GGGTGCGACCTCATTACGCGACGATAAGACGGTCGGATTTGGTGCAGCCAATGCCTCAACCGACTACGTCGCCATGAAGT
CTAGAATTTTAGAAGAGTTGAAAAAACGGTATCGCCCAGAGTTTCTCAACCGTATCGATGAAAGCATTGTTTTCCACCCA
CTTTCTGAGCAGGAATTATCAGATATCGTAAAAATCATGGCTAAACCATTGATTAAACGTTTGGCAGAACGTCACATCAC
CTTGAAACTTTCTGCCACTGCCTATCAGCTTATCGCTAAAAATGGCTTTGAACCAGAATATGGGGCCCGTCCAATCAGAA
AAGCTTTGGAGAAAAAACTTGAGAATCCTCTGTCGGATAAAATTTTGTCAGGCGAAATTAAGGCTGGAAATAGTGTGACA
GTAGGCGTTTCCAAAGGTGAGTTGACAATCAAAGTTATTGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
62.099 |
99.509 |
0.618 |
| clpC | Streptococcus pneumoniae Rx1 |
49.337 |
100 |
0.502 |
| clpC | Streptococcus pneumoniae D39 |
49.337 |
100 |
0.502 |
| clpC | Streptococcus thermophilus LMD-9 |
49.041 |
100 |
0.502 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.216 |
100 |
0.501 |
| clpC | Streptococcus thermophilus LMG 18311 |
48.801 |
100 |
0.5 |
| clpC | Streptococcus mutans UA159 |
47.368 |
100 |
0.486 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
48.112 |
100 |
0.485 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae Rx1 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus mutans UA159 |
46.178 |
78.747 |
0.364 |