Detailed information NTG1089292

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: ACLSIV_RS03430
• Genome accession: NZ_CP178385
• Coordinates: 702382..703098 (-)
• Length: 238 a.a.
• NCBI ID: WP_096040174.1
• Uniprot ID: A0A290Q043
• Organism: Lactococcus raffinolactis strain GCULR
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 697382..708098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSIV_RS03415 (ACLSIV_03415)	-	698159..699118 (+)	960	WP_061774957.1	YbbR-like domain-containing protein	-
ACLSIV_RS03420 (ACLSIV_03420)	glmM	699192..700547 (+)	1356	WP_412921953.1	phosphoglucosamine mutase	-
ACLSIV_RS03425 (ACLSIV_03425)	nox	700677..702005 (-)	1329	WP_061774955.1	H2O-forming NADH oxidase	-
ACLSIV_RS03430 (ACLSIV_03430)	treR	702382..703098 (-)	717	WP_096040174.1	trehalose operon repressor	Regulator
ACLSIV_RS03435 (ACLSIV_03435)	-	703208..704080 (+)	873	WP_167841142.1	Cof-type HAD-IIB family hydrolase	-
ACLSIV_RS03440 (ACLSIV_03440)	-	704225..705214 (+)	990	WP_096040176.1	LacI family DNA-binding transcriptional regulator	-
ACLSIV_RS03445 (ACLSIV_03445)	-	705765..707261 (+)	1497	WP_412921956.1	hypothetical protein	-

Sequence

Protein

• Length: 238 a.a.
• Molecular weight: 27771.91 Da
• Isoelectric Point: 7.4144

>NTDB_id=1089292 ACLSIV_RS03430 WP_096040174.1 702382..703098(-) (treR) [Lactococcus raffinolactis strain GCULR]
MKKYEIILHDLEYKIKNKTYQENDLLPSENELVKIYDASRATIRQALKILEEKGLIQKQKGRGSVVIASSKLNFPISGLT
SYKELQNSLGFESVTEVIKFDKITVDSELAAKTLFEIGIPVWRIIRVRKIDGEAVVLDHDFVKYDICPNMTKTDVAYSLY
DYLEKQLKIEISFAQKEITIDFVNDEDRQLLDLNLLDRHIVSVKSHVFLNDASVFQYTDSRHQVDKFRFTEFARRQKR

Nucleotide

• Length: 717 bp

>NTDB_id=1089292 ACLSIV_RS03430 WP_096040174.1 702382..703098(-) (treR) [Lactococcus raffinolactis strain GCULR]
ATGAAAAAATATGAAATAATTTTACACGATTTGGAATACAAAATAAAAAATAAGACTTATCAGGAAAACGATCTCCTGCC
TAGTGAAAATGAATTGGTCAAAATCTACGACGCCAGTAGAGCAACGATTCGCCAAGCGCTGAAAATTTTGGAAGAAAAGG
GGTTAATTCAGAAACAAAAAGGGCGAGGCTCTGTGGTTATTGCTTCTAGCAAACTTAATTTTCCGATTTCTGGCTTAACC
AGCTACAAGGAACTACAAAATTCACTCGGATTTGAAAGTGTCACTGAAGTCATCAAATTTGACAAAATCACAGTTGACAG
TGAACTTGCTGCAAAAACACTTTTTGAAATCGGAATCCCTGTGTGGCGTATCATACGCGTTCGTAAGATTGACGGTGAAG
CCGTCGTGCTTGATCATGACTTCGTCAAATATGATATTTGTCCCAATATGACCAAAACAGATGTCGCTTATTCACTCTAC
GACTACCTTGAAAAACAGCTGAAAATTGAGATTTCCTTCGCTCAGAAAGAAATTACCATTGATTTCGTTAATGACGAAGA
TCGGCAACTCTTGGACCTGAATCTCTTGGACCGCCATATCGTCAGTGTCAAAAGCCATGTTTTTCTCAATGATGCAAGCG
TCTTTCAATACACGGATAGTCGACATCAAGTTGATAAATTCCGGTTCACTGAATTTGCCAGACGGCAAAAACGTTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, gntR family (GntR) (4-66)

• UTRA domain (UTRA) (89-228)

3D structure

• AlphaFold DB: A0A290Q043

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	48.945	99.58	0.487