Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   GT95_RS06905 Genome accession   NZ_CP008813
Coordinates   1311722..1312204 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain C001     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1306722..1317204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT95_RS06885 (GT95_06695) alsS 1306981..1308663 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  GT95_RS06890 (GT95_06700) - 1308773..1309999 (-) 1227 WP_000934874.1 hypothetical protein -
  GT95_RS06895 (GT95_06705) - 1309989..1311179 (-) 1191 WP_001081531.1 AI-2E family transporter -
  GT95_RS06900 (GT95_06710) - 1311271..1311732 (-) 462 WP_000796044.1 NUDIX hydrolase -
  GT95_RS06905 (GT95_06715) mutX 1311722..1312204 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  GT95_RS06910 (GT95_06720) hylB 1312422..1315655 (+) 3234 WP_017646963.1 hyaluronate lyase -
  GT95_RS06915 (GT95_06725) rfbB 1315707..1316753 (-) 1047 WP_000134280.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=108928 GT95_RS06905 WP_000163512.1 1311722..1312204(-) (mutX) [Streptococcus agalactiae strain C001]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=108928 GT95_RS06905 WP_000163512.1 1311722..1312204(-) (mutX) [Streptococcus agalactiae strain C001]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains


Predicted by InterProScan.

(3-130)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712


Multiple sequence alignment