Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | ACL0VS_RS05735 | Genome accession | NZ_CP178384 |
| Coordinates | 1353680..1355029 (+) | Length | 449 a.a. |
| NCBI ID | WP_101239368.1 | Uniprot ID | A0A2N0XF66 |
| Organism | Chryseobacterium sp. PMSZPI | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1348680..1360029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL0VS_RS05720 (ACL0VS_05720) | yidC | 1348685..1350484 (-) | 1800 | WP_101239371.1 | membrane protein insertase YidC | - |
| ACL0VS_RS05725 (ACL0VS_05725) | - | 1350663..1352270 (-) | 1608 | WP_101239370.1 | CTP synthase | - |
| ACL0VS_RS05730 (ACL0VS_05730) | - | 1352747..1353316 (-) | 570 | WP_101239369.1 | YceI family protein | - |
| ACL0VS_RS05735 (ACL0VS_05735) | radA | 1353680..1355029 (+) | 1350 | WP_101239368.1 | DNA repair protein RadA | Machinery gene |
| ACL0VS_RS05740 (ACL0VS_05740) | - | 1355201..1355794 (+) | 594 | WP_101239367.1 | ACP phosphodiesterase | - |
| ACL0VS_RS05745 (ACL0VS_05745) | - | 1355798..1356316 (-) | 519 | WP_101239366.1 | DUF6702 family protein | - |
| ACL0VS_RS05750 (ACL0VS_05750) | - | 1356398..1359658 (-) | 3261 | WP_101239365.1 | S8 family peptidase | - |
Sequence
Protein
Download Length: 449 a.a. Molecular weight: 49955.60 Da Isoelectric Point: 6.5083
>NTDB_id=1089261 ACL0VS_RS05735 WP_101239368.1 1353680..1355029(+) (radA) [Chryseobacterium sp. PMSZPI]
MAKLKTAYFCQNCGTQYPQWLGQCKNCGEWNTLVEEVVEKTSHKTPPFSKSKQHVINIVEVEAIEEPRIKTPSEELNRVL
GGGIVLGSVTLIGGEPGIGKSTLLLQLALKMKKKIFYVSGEESASQIKMRADRLTDIQNPNCYLFTETSLEKILHEAKKL
EPDFMIIDSIQTLQSQLIESSPGTVSQIRECSNEIIKYAKENNIPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNH
LFRLLRANKNRFGSTSEIGIYEMISQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRPMLIEIQALVSTAVYGTPQRS
STGFDSKRLNMLLAVLEKRAGFQLGAKDVFLNITGGIKTDDPALDLAVVASILSSNEDIAISEHFCFAGEIGLSGEIRPV
AQIEQRISEAEKLGYEKIFVSNLNKIPKRKFGIKIEEVSKIEDFHERIF
MAKLKTAYFCQNCGTQYPQWLGQCKNCGEWNTLVEEVVEKTSHKTPPFSKSKQHVINIVEVEAIEEPRIKTPSEELNRVL
GGGIVLGSVTLIGGEPGIGKSTLLLQLALKMKKKIFYVSGEESASQIKMRADRLTDIQNPNCYLFTETSLEKILHEAKKL
EPDFMIIDSIQTLQSQLIESSPGTVSQIRECSNEIIKYAKENNIPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNH
LFRLLRANKNRFGSTSEIGIYEMISQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRPMLIEIQALVSTAVYGTPQRS
STGFDSKRLNMLLAVLEKRAGFQLGAKDVFLNITGGIKTDDPALDLAVVASILSSNEDIAISEHFCFAGEIGLSGEIRPV
AQIEQRISEAEKLGYEKIFVSNLNKIPKRKFGIKIEEVSKIEDFHERIF
Nucleotide
Download Length: 1350 bp
>NTDB_id=1089261 ACL0VS_RS05735 WP_101239368.1 1353680..1355029(+) (radA) [Chryseobacterium sp. PMSZPI]
ATGGCAAAACTGAAAACAGCATATTTCTGTCAAAACTGCGGAACTCAATACCCTCAATGGTTGGGACAATGTAAAAACTG
CGGAGAATGGAACACTTTAGTAGAAGAAGTCGTTGAAAAGACATCTCACAAAACTCCTCCTTTTTCGAAATCCAAACAAC
ATGTGATCAACATTGTTGAAGTGGAAGCGATTGAGGAGCCAAGAATCAAAACCCCTTCTGAAGAACTAAACCGGGTACTA
GGCGGTGGTATTGTTCTAGGATCTGTTACCTTGATTGGAGGAGAGCCGGGAATCGGAAAGTCTACCCTCTTACTTCAGCT
TGCCCTAAAAATGAAGAAGAAAATTTTCTACGTTTCCGGAGAGGAAAGCGCTTCTCAAATTAAAATGAGAGCAGACCGAT
TAACCGATATTCAAAACCCCAATTGCTATCTGTTTACCGAAACTTCTTTGGAAAAAATCTTGCATGAAGCGAAAAAACTG
GAACCGGATTTCATGATTATTGACTCTATCCAGACTCTTCAATCACAACTAATAGAAAGCTCCCCCGGAACGGTTTCCCA
AATCAGAGAGTGCTCCAATGAAATCATTAAATATGCCAAAGAAAACAATATTCCCGTATTTCTGGTAGGTCACATTACTA
AAGACGGCCAGATTGCCGGTCCGAAAGTTTTGGAACATATGGTGGATGTCGTTTTAAATTTTGATGGCGACAGAAACCAC
CTTTTCAGATTATTGAGAGCTAATAAAAACCGTTTTGGCTCTACTTCAGAAATTGGAATTTATGAAATGATTTCACAAGG
TTTAAAAGAAATTAAAAACCCTTCAGAAATCCTTATCACAAAGAAATTTGAAGAACTTTCCGGAAATTCCGTTGCAGTAA
CGTTGGAAGGAAACCGCCCTATGCTTATTGAGATTCAGGCACTCGTAAGTACAGCCGTATACGGAACACCACAGAGAAGT
TCTACAGGTTTCGATTCCAAAAGATTAAATATGCTTTTAGCCGTATTGGAAAAGCGTGCCGGGTTTCAGTTAGGTGCAAA
AGATGTTTTCTTAAACATTACCGGGGGAATTAAAACAGATGATCCTGCATTAGATCTTGCCGTTGTAGCTTCAATTCTTT
CTTCCAATGAAGATATTGCCATATCTGAGCATTTTTGTTTTGCCGGAGAAATTGGTTTGAGTGGCGAAATACGACCTGTA
GCACAAATTGAACAAAGAATTTCGGAAGCTGAAAAACTTGGGTACGAAAAAATATTTGTATCCAATCTTAATAAAATACC
AAAAAGAAAATTTGGAATTAAGATCGAAGAAGTTAGTAAGATTGAGGACTTTCATGAAAGGATTTTTTAG
ATGGCAAAACTGAAAACAGCATATTTCTGTCAAAACTGCGGAACTCAATACCCTCAATGGTTGGGACAATGTAAAAACTG
CGGAGAATGGAACACTTTAGTAGAAGAAGTCGTTGAAAAGACATCTCACAAAACTCCTCCTTTTTCGAAATCCAAACAAC
ATGTGATCAACATTGTTGAAGTGGAAGCGATTGAGGAGCCAAGAATCAAAACCCCTTCTGAAGAACTAAACCGGGTACTA
GGCGGTGGTATTGTTCTAGGATCTGTTACCTTGATTGGAGGAGAGCCGGGAATCGGAAAGTCTACCCTCTTACTTCAGCT
TGCCCTAAAAATGAAGAAGAAAATTTTCTACGTTTCCGGAGAGGAAAGCGCTTCTCAAATTAAAATGAGAGCAGACCGAT
TAACCGATATTCAAAACCCCAATTGCTATCTGTTTACCGAAACTTCTTTGGAAAAAATCTTGCATGAAGCGAAAAAACTG
GAACCGGATTTCATGATTATTGACTCTATCCAGACTCTTCAATCACAACTAATAGAAAGCTCCCCCGGAACGGTTTCCCA
AATCAGAGAGTGCTCCAATGAAATCATTAAATATGCCAAAGAAAACAATATTCCCGTATTTCTGGTAGGTCACATTACTA
AAGACGGCCAGATTGCCGGTCCGAAAGTTTTGGAACATATGGTGGATGTCGTTTTAAATTTTGATGGCGACAGAAACCAC
CTTTTCAGATTATTGAGAGCTAATAAAAACCGTTTTGGCTCTACTTCAGAAATTGGAATTTATGAAATGATTTCACAAGG
TTTAAAAGAAATTAAAAACCCTTCAGAAATCCTTATCACAAAGAAATTTGAAGAACTTTCCGGAAATTCCGTTGCAGTAA
CGTTGGAAGGAAACCGCCCTATGCTTATTGAGATTCAGGCACTCGTAAGTACAGCCGTATACGGAACACCACAGAGAAGT
TCTACAGGTTTCGATTCCAAAAGATTAAATATGCTTTTAGCCGTATTGGAAAAGCGTGCCGGGTTTCAGTTAGGTGCAAA
AGATGTTTTCTTAAACATTACCGGGGGAATTAAAACAGATGATCCTGCATTAGATCTTGCCGTTGTAGCTTCAATTCTTT
CTTCCAATGAAGATATTGCCATATCTGAGCATTTTTGTTTTGCCGGAGAAATTGGTTTGAGTGGCGAAATACGACCTGTA
GCACAAATTGAACAAAGAATTTCGGAAGCTGAAAAACTTGGGTACGAAAAAATATTTGTATCCAATCTTAATAAAATACC
AAAAAGAAAATTTGGAATTAAGATCGAAGAAGTTAGTAAGATTGAGGACTTTCATGAAAGGATTTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus pneumoniae D39 |
49.353 |
100 |
0.51 |
| radA | Streptococcus mitis NCTC 12261 |
49.353 |
100 |
0.51 |
| radA | Streptococcus pneumoniae Rx1 |
49.353 |
100 |
0.51 |
| radA | Streptococcus pneumoniae R6 |
49.353 |
100 |
0.51 |
| radA | Streptococcus pneumoniae TIGR4 |
49.353 |
100 |
0.51 |
| radA | Streptococcus mitis SK321 |
49.134 |
100 |
0.506 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
49.336 |
100 |
0.497 |