Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACLNGX_RS07360 Genome accession   NZ_CP178374
Coordinates   1458802..1459266 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 2023     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453802..1464266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLNGX_RS07340 (ACLNGX_07340) - 1454282..1456102 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  ACLNGX_RS07345 (ACLNGX_07345) - 1456078..1457297 (-) 1220 Protein_1388 aminotransferase A -
  ACLNGX_RS07350 (ACLNGX_07350) - 1457498..1457659 (-) 162 WP_007409608.1 hypothetical protein -
  ACLNGX_RS07355 (ACLNGX_07355) cheV 1457848..1458759 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  ACLNGX_RS07360 (ACLNGX_07360) kre 1458802..1459266 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACLNGX_RS07365 (ACLNGX_07365) - 1459389..1460681 (-) 1293 WP_071391909.1 MFS transporter -
  ACLNGX_RS07370 (ACLNGX_07370) - 1460757..1461251 (-) 495 WP_166706324.1 L,D-transpeptidase family protein -
  ACLNGX_RS07375 (ACLNGX_07375) - 1461326..1462189 (-) 864 WP_071391907.1 metallophosphoesterase -
  ACLNGX_RS07380 (ACLNGX_07380) fadH 1462333..1463097 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACLNGX_RS07385 (ACLNGX_07385) - 1463208..1463756 (+) 549 WP_071391906.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1089143 ACLNGX_RS07360 WP_003154622.1 1458802..1459266(-) (kre) [Bacillus velezensis strain 2023]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1089143 ACLNGX_RS07360 WP_003154622.1 1458802..1459266(-) (kre) [Bacillus velezensis strain 2023]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment