Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACKWDP_RS10015 | Genome accession | NZ_CP178354 |
| Coordinates | 2042738..2043118 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain A297 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2037738..2048118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKWDP_RS09985 (ACKWDP_09985) | tadA | 2037857..2038360 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ACKWDP_RS09990 (ACKWDP_09990) | - | 2038367..2039491 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACKWDP_RS09995 (ACKWDP_09995) | ung | 2039488..2040201 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACKWDP_RS10000 (ACKWDP_10000) | - | 2040252..2040848 (-) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACKWDP_RS10005 (ACKWDP_10005) | gspK | 2041078..2042037 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ACKWDP_RS10010 (ACKWDP_10010) | xcpW | 2042037..2042738 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACKWDP_RS10015 (ACKWDP_10015) | xcpV | 2042738..2043118 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACKWDP_RS10020 (ACKWDP_10020) | - | 2043108..2043662 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACKWDP_RS10025 (ACKWDP_10025) | - | 2043672..2044280 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACKWDP_RS10030 (ACKWDP_10030) | - | 2044318..2045091 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ACKWDP_RS10035 (ACKWDP_10035) | - | 2045109..2045450 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ACKWDP_RS10040 (ACKWDP_10040) | - | 2045462..2046442 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ACKWDP_RS10045 (ACKWDP_10045) | kdsB | 2046454..2047215 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=1089046 ACKWDP_RS10015 WP_000836914.1 2042738..2043118(-) (xcpV) [Acinetobacter baumannii strain A297]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1089046 ACKWDP_RS10015 WP_000836914.1 2042738..2043118(-) (xcpV) [Acinetobacter baumannii strain A297]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |