Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACLUR8_RS09590 | Genome accession | NZ_CP178253 |
| Coordinates | 2057149..2057529 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A118 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2052149..2062529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLUR8_RS09560 (ACLUR8_09560) | tadA | 2052268..2052771 (-) | 504 | WP_031946509.1 | tRNA adenosine(34) deaminase TadA | - |
| ACLUR8_RS09565 (ACLUR8_09565) | - | 2052778..2053902 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACLUR8_RS09570 (ACLUR8_09570) | ung | 2053899..2054612 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| ACLUR8_RS09575 (ACLUR8_09575) | - | 2054663..2055259 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACLUR8_RS09580 (ACLUR8_09580) | gspK | 2055489..2056448 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ACLUR8_RS09585 (ACLUR8_09585) | xcpW | 2056448..2057149 (-) | 702 | WP_032025534.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACLUR8_RS09590 (ACLUR8_09590) | xcpV | 2057149..2057529 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACLUR8_RS09595 (ACLUR8_09595) | - | 2057519..2058073 (-) | 555 | WP_000841371.1 | type II secretion system protein | - |
| ACLUR8_RS09600 (ACLUR8_09600) | - | 2058083..2058691 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACLUR8_RS09605 (ACLUR8_09605) | - | 2058729..2059502 (-) | 774 | WP_000497302.1 | TatD family hydrolase | - |
| ACLUR8_RS09610 (ACLUR8_09610) | - | 2059520..2059861 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACLUR8_RS09615 (ACLUR8_09615) | - | 2059873..2060853 (-) | 981 | WP_004747384.1 | DNA polymerase III, delta' subunit | - |
| ACLUR8_RS09620 (ACLUR8_09620) | kdsB | 2060865..2061626 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1088773 ACLUR8_RS09590 WP_000836911.1 2057149..2057529(-) (xcpV) [Acinetobacter baumannii strain A118]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1088773 ACLUR8_RS09590 WP_000836911.1 2057149..2057529(-) (xcpV) [Acinetobacter baumannii strain A118]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |