Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACLUR6_RS09790 | Genome accession | NZ_CP178250 |
| Coordinates | 2093305..2093685 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ACI | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2088305..2098685
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLUR6_RS09760 (ACLUR6_09760) | tadA | 2088424..2088927 (-) | 504 | WP_031946509.1 | tRNA adenosine(34) deaminase TadA | - |
| ACLUR6_RS09765 (ACLUR6_09765) | - | 2088934..2090058 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACLUR6_RS09770 (ACLUR6_09770) | ung | 2090055..2090768 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| ACLUR6_RS09775 (ACLUR6_09775) | - | 2090819..2091415 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACLUR6_RS09780 (ACLUR6_09780) | gspK | 2091645..2092604 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ACLUR6_RS09785 (ACLUR6_09785) | xcpW | 2092604..2093305 (-) | 702 | WP_032025534.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACLUR6_RS09790 (ACLUR6_09790) | xcpV | 2093305..2093685 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACLUR6_RS09795 (ACLUR6_09795) | - | 2093675..2094229 (-) | 555 | WP_000841371.1 | type II secretion system protein | - |
| ACLUR6_RS09800 (ACLUR6_09800) | - | 2094239..2094847 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACLUR6_RS09805 (ACLUR6_09805) | - | 2094885..2095658 (-) | 774 | WP_000497302.1 | TatD family hydrolase | - |
| ACLUR6_RS09810 (ACLUR6_09810) | - | 2095676..2096017 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACLUR6_RS09815 (ACLUR6_09815) | - | 2096029..2097009 (-) | 981 | WP_004747384.1 | DNA polymerase III, delta' subunit | - |
| ACLUR6_RS09820 (ACLUR6_09820) | kdsB | 2097021..2097782 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1088698 ACLUR6_RS09790 WP_000836911.1 2093305..2093685(-) (xcpV) [Acinetobacter baumannii strain ACI]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1088698 ACLUR6_RS09790 WP_000836911.1 2093305..2093685(-) (xcpV) [Acinetobacter baumannii strain ACI]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |