Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACLII2_RS17470 Genome accession   NZ_CP178213
Coordinates   3291000..3291794 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3286000..3296794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS17435 ephM 3286842..3287702 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  ACLII2_RS17440 spdL 3287689..3288021 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ACLII2_RS17445 yfhK 3288106..3288624 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  ACLII2_RS17450 yfhJ 3288769..3289038 (-) 270 WP_003243789.1 YfhJ family protein -
  ACLII2_RS17455 sspK 3289163..3289315 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACLII2_RS17460 yfhI 3289348..3290541 (-) 1194 WP_003243500.1 MFS transporter -
  ACLII2_RS17465 yfhH 3290684..3290998 (-) 315 WP_003244592.1 YfhH family protein -
  ACLII2_RS17470 recX 3291000..3291794 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  ACLII2_RS17475 yfhF 3291883..3292794 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  ACLII2_RS17480 yfhE 3292849..3292959 (+) 111 WP_003223230.1 YfhE family protein -
  ACLII2_RS17485 yfhD 3293026..3293217 (+) 192 WP_003233561.1 YfhD family protein -
  ACLII2_RS17490 yfhC 3293256..3293840 (-) 585 WP_003243940.1 nitroreductase -
  ACLII2_RS17495 yfhB 3293928..3294809 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  ACLII2_RS17500 sxzA 3294924..3295955 (-) 1032 WP_003243057.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1088330 ACLII2_RS17470 WP_003243354.1 3291000..3291794(-) (recX) [Bacillus subtilis subsp. subtilis strain BM107]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1088330 ACLII2_RS17470 WP_003243354.1 3291000..3291794(-) (recX) [Bacillus subtilis subsp. subtilis strain BM107]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment