Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACLII2_RS15815 Genome accession   NZ_CP178213
Coordinates   2986389..2987540 (-) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2981389..2992540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS15790 cwlQ 2981528..2982262 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  ACLII2_RS15795 bhbI 2982517..2982915 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACLII2_RS15800 spxH 2982912..2983811 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  ACLII2_RS15805 - 2984125..2984292 (+) 168 WP_003244944.1 hypothetical protein -
  ACLII2_RS15810 pepF 2984330..2986159 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  ACLII2_RS15815 coiA 2986389..2987540 (-) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  ACLII2_RS15820 - 2987584..2987706 (+) 123 WP_003245684.1 hypothetical protein -
  ACLII2_RS15825 mecA 2987701..2988357 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  ACLII2_RS15830 - 2988324..2988464 (-) 141 WP_119122854.1 hypothetical protein -
  ACLII2_RS15835 yjbE 2988634..2989290 (+) 657 WP_003232944.1 TerC family protein -
  ACLII2_RS15840 spx 2989333..2989728 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  ACLII2_RS15845 yjbC 2989909..2990487 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  ACLII2_RS15850 yjbB 2990651..2991868 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=1088317 ACLII2_RS15815 WP_003245839.1 2986389..2987540(-) (coiA) [Bacillus subtilis subsp. subtilis strain BM107]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1088317 ACLII2_RS15815 WP_003245839.1 2986389..2987540(-) (coiA) [Bacillus subtilis subsp. subtilis strain BM107]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment