Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACLII2_RS14440 Genome accession   NZ_CP178213
Coordinates   2742398..2742862 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2737398..2747862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS14420 fadH 2738586..2739350 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  ACLII2_RS14425 ppeE 2739493..2740353 (+) 861 WP_003232400.1 metallophosphoesterase -
  ACLII2_RS14430 ltdD 2740410..2740904 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  ACLII2_RS14435 ykuC 2740980..2742272 (+) 1293 WP_003245267.1 MFS transporter -
  ACLII2_RS14440 kre 2742398..2742862 (+) 465 WP_003232406.1 YkyB family protein Regulator
  ACLII2_RS14445 cheV 2742906..2743817 (-) 912 WP_009967126.1 chemotaxis protein CheV -
  ACLII2_RS14450 - 2744021..2744182 (+) 162 WP_003245246.1 hypothetical protein -
  ACLII2_RS14455 dapX 2744384..2745565 (+) 1182 WP_003232415.1 aminotransferase A -
  ACLII2_RS14460 kinA 2745576..2747396 (-) 1821 WP_003245779.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1088313 ACLII2_RS14440 WP_003232406.1 2742398..2742862(+) (kre) [Bacillus subtilis subsp. subtilis strain BM107]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1088313 ACLII2_RS14440 WP_003232406.1 2742398..2742862(+) (kre) [Bacillus subtilis subsp. subtilis strain BM107]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment