Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACLII2_RS14325 Genome accession   NZ_CP178213
Coordinates   2723060..2723635 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2718060..2728635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS14300 mobB 2718456..2718977 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACLII2_RS14305 glp 2718938..2720230 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  ACLII2_RS14310 moeB 2720248..2721267 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACLII2_RS14315 mobA 2721318..2721917 (-) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  ACLII2_RS14320 cse15 2722054..2723019 (+) 966 WP_003245018.1 spore protein Cse15 -
  ACLII2_RS14325 rok 2723060..2723635 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACLII2_RS14330 ykuV 2724101..2724547 (-) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  ACLII2_RS14335 ahpA 2724619..2725161 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACLII2_RS14340 mscT 2725398..2726201 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ACLII2_RS14345 ykuS 2726238..2726483 (-) 246 WP_003232382.1 YkuS family protein -
  ACLII2_RS14350 dapI 2726545..2727669 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  ACLII2_RS14355 dapD 2727739..2728449 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1088312 ACLII2_RS14325 WP_003232378.1 2723060..2723635(-) (rok) [Bacillus subtilis subsp. subtilis strain BM107]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1088312 ACLII2_RS14325 WP_003232378.1 2723060..2723635(-) (rok) [Bacillus subtilis subsp. subtilis strain BM107]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment