Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACLII2_RS09020 Genome accession   NZ_CP178213
Coordinates   1698600..1699403 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693600..1704403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS09000 yqxC 1693710..1694555 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  ACLII2_RS09005 argR 1694653..1695102 (+) 450 WP_003230265.1 arginine repressor ArgR -
  ACLII2_RS09010 recN 1695139..1696869 (+) 1731 WP_003230267.1 DNA repair protein RecN Machinery gene
  ACLII2_RS09015 spoIVB 1697044..1698324 (+) 1281 WP_004398697.1 SpoIVB peptidase -
  ACLII2_RS09020 spo0A 1698600..1699403 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  ACLII2_RS09025 yqiG 1699868..1700986 (-) 1119 WP_004398691.1 NADH-dependent flavin oxidoreductase -
  ACLII2_RS09030 - 1701059..1701211 (-) 153 WP_003230276.1 hypothetical protein -
  ACLII2_RS09035 yqiH 1701519..1701812 (+) 294 WP_003230284.1 lipoprotein -
  ACLII2_RS09040 yqiI 1701827..1702447 (+) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase family protein -
  ACLII2_RS09045 glpQB 1702526..1703257 (+) 732 WP_003230288.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=1088305 ACLII2_RS09020 WP_003226427.1 1698600..1699403(+) (spo0A) [Bacillus subtilis subsp. subtilis strain BM107]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1088305 ACLII2_RS09020 WP_003226427.1 1698600..1699403(+) (spo0A) [Bacillus subtilis subsp. subtilis strain BM107]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATCTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment