Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACK2SD_RS22445 Genome accession   NZ_CP178183
Coordinates   5038865..5039266 (-) Length   133 a.a.
NCBI ID   WP_029614259.1    Uniprot ID   A0AAI8K632
Organism   Pseudomonas sp. SC11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5033865..5044266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2SD_RS22430 (ACK2SD_22430) - 5035816..5037837 (-) 2022 WP_116890006.1 methyl-accepting chemotaxis protein -
  ACK2SD_RS22435 (ACK2SD_22435) - 5037902..5038456 (-) 555 WP_039582750.1 chemotaxis protein CheW -
  ACK2SD_RS22440 (ACK2SD_22440) pilH 5038453..5038818 (-) 366 WP_029614258.1 twitching motility response regulator PilH -
  ACK2SD_RS22445 (ACK2SD_22445) pilG 5038865..5039266 (-) 402 WP_029614259.1 response regulator Regulator
  ACK2SD_RS22450 (ACK2SD_22450) gshB 5039501..5040457 (+) 957 WP_412460884.1 glutathione synthase -
  ACK2SD_RS22455 (ACK2SD_22455) - 5040578..5041477 (+) 900 WP_342649906.1 energy transducer TonB -
  ACK2SD_RS22460 (ACK2SD_22460) - 5041539..5042108 (+) 570 WP_039582746.1 YqgE/AlgH family protein -
  ACK2SD_RS22465 (ACK2SD_22465) ruvX 5042108..5042533 (+) 426 WP_116887414.1 Holliday junction resolvase RuvX -
  ACK2SD_RS22470 (ACK2SD_22470) pyrR 5042580..5043098 (+) 519 WP_039582744.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACK2SD_RS22475 (ACK2SD_22475) - 5043111..5044115 (+) 1005 WP_029614263.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14745.09 Da        Isoelectric Point: 6.7512

>NTDB_id=1088135 ACK2SD_RS22445 WP_029614259.1 5038865..5039266(-) (pilG) [Pseudomonas sp. SC11]
MEQPLKVMVIDDSRTIRRTAQTLLGEVGCEVITASDGFDALAKIVDHAPRIIFVDVLMPRLDGYQTCAIIKHNALFKDTP
VVLLSSRDGLFDKARGRVVGSDQFLTKPFTKEELLEAIRVHVPGFAEHAHHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1088135 ACK2SD_RS22445 WP_029614259.1 5038865..5039266(-) (pilG) [Pseudomonas sp. SC11]
ATGGAACAACCTCTGAAGGTGATGGTGATCGACGACTCGCGCACCATCCGCCGGACCGCCCAGACGCTGCTAGGGGAGGT
GGGTTGCGAGGTGATCACCGCCAGCGACGGTTTCGATGCCCTGGCCAAGATCGTCGATCATGCGCCGCGGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGATCATCAAGCACAACGCGCTGTTCAAGGACACCCCG
GTGGTGTTGCTGTCCTCGCGCGATGGCTTGTTCGACAAGGCCCGCGGGCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
GCCGTTCACCAAGGAAGAATTGCTCGAAGCGATCCGCGTGCATGTGCCCGGATTCGCCGAACATGCACACCACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.033

91.729

0.624

Multiple sequence alignment