Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ABWW24_RS10445 | Genome accession | NZ_AP031330 |
| Coordinates | 1913548..1913856 (+) | Length | 102 a.a. |
| NCBI ID | WP_041444468.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF25 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1908548..1918856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW24_RS10415 (TthTF25_20500) | - | 1909630..1910094 (+) | 465 | WP_224065382.1 | hypothetical protein | - |
| ABWW24_RS10420 (TthTF25_20510) | pfkA | 1910071..1911039 (-) | 969 | WP_124105241.1 | 6-phosphofructokinase | - |
| ABWW24_RS10425 (TthTF25_20520) | rsmI | 1911036..1911830 (-) | 795 | WP_353300372.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABWW24_RS10430 (TthTF25_20530) | - | 1911832..1912326 (-) | 495 | WP_124105239.1 | TFIIB-type zinc ribbon-containing protein | - |
| ABWW24_RS10435 (TthTF25_20540) | - | 1912389..1912916 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| ABWW24_RS10440 (TthTF25_20550) | - | 1912949..1913575 (+) | 627 | WP_143591818.1 | YcxB family protein | - |
| ABWW24_RS10445 (TthTF25_20560) | comEA | 1913548..1913856 (+) | 309 | WP_041444468.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ABWW24_RS10450 (TthTF25_20570) | comA/comEC | 1913853..1915886 (+) | 2034 | WP_353300373.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| ABWW24_RS10455 (TthTF25_20580) | - | 1915874..1916683 (-) | 810 | WP_014510984.1 | ParB/RepB/Spo0J family partition protein | - |
| ABWW24_RS10460 (TthTF25_20590) | soj | 1916667..1917416 (-) | 750 | WP_353300374.1 | chromosome-partitioning ATPase Soj | - |
| ABWW24_RS10465 (TthTF25_20600) | rsmG | 1917410..1918159 (-) | 750 | WP_353300375.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10933.21 Da Isoelectric Point: 10.3435
>NTDB_id=108771 ABWW24_RS10445 WP_041444468.1 1913548..1913856(+) (comEA) [Thermus thermophilus strain TF25]
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=108771 ABWW24_RS10445 WP_041444468.1 1913548..1913856(+) (comEA) [Thermus thermophilus strain TF25]
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |