Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AB4Y54_RS10455 | Genome accession | NZ_AP031325 |
| Coordinates | 1914622..1914930 (+) | Length | 102 a.a. |
| NCBI ID | WP_041444468.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF21 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1909622..1919930
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4Y54_RS10425 (TthTF21_20530) | - | 1910704..1911168 (+) | 465 | WP_224065382.1 | hypothetical protein | - |
| AB4Y54_RS10430 (TthTF21_20540) | pfkA | 1911145..1912113 (-) | 969 | WP_124105241.1 | 6-phosphofructokinase | - |
| AB4Y54_RS10435 (TthTF21_20550) | rsmI | 1912110..1912904 (-) | 795 | WP_353300372.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AB4Y54_RS10440 (TthTF21_20560) | - | 1912906..1913400 (-) | 495 | WP_124105239.1 | TFIIB-type zinc ribbon-containing protein | - |
| AB4Y54_RS10445 (TthTF21_20570) | - | 1913463..1913990 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| AB4Y54_RS10450 (TthTF21_20580) | - | 1914023..1914649 (+) | 627 | WP_143591818.1 | YcxB family protein | - |
| AB4Y54_RS10455 (TthTF21_20590) | comEA | 1914622..1914930 (+) | 309 | WP_041444468.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| AB4Y54_RS10460 (TthTF21_20600) | comA/comEC | 1914927..1916960 (+) | 2034 | WP_353300373.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| AB4Y54_RS10465 (TthTF21_20610) | - | 1916948..1917757 (-) | 810 | WP_014510984.1 | ParB/RepB/Spo0J family partition protein | - |
| AB4Y54_RS10470 (TthTF21_20620) | soj | 1917741..1918490 (-) | 750 | WP_353300374.1 | chromosome-partitioning ATPase Soj | - |
| AB4Y54_RS10475 (TthTF21_20630) | rsmG | 1918484..1919233 (-) | 750 | WP_353300375.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10933.21 Da Isoelectric Point: 10.3435
>NTDB_id=108717 AB4Y54_RS10455 WP_041444468.1 1914622..1914930(+) (comEA) [Thermus thermophilus strain TF21]
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=108717 AB4Y54_RS10455 WP_041444468.1 1914622..1914930(+) (comEA) [Thermus thermophilus strain TF21]
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |