Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ABWW34_RS10465 | Genome accession | NZ_AP031323 |
| Coordinates | 1915320..1915628 (+) | Length | 102 a.a. |
| NCBI ID | WP_041444468.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF19 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1910320..1920628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW34_RS10435 (TthTF19_20580) | - | 1911402..1911866 (+) | 465 | WP_224065382.1 | hypothetical protein | - |
| ABWW34_RS10440 (TthTF19_20590) | pfkA | 1911843..1912811 (-) | 969 | WP_124105241.1 | 6-phosphofructokinase | - |
| ABWW34_RS10445 (TthTF19_20600) | rsmI | 1912808..1913602 (-) | 795 | WP_353300372.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABWW34_RS10450 (TthTF19_20610) | - | 1913604..1914098 (-) | 495 | WP_124105239.1 | TFIIB-type zinc ribbon-containing protein | - |
| ABWW34_RS10455 (TthTF19_20620) | - | 1914161..1914688 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| ABWW34_RS10460 (TthTF19_20630) | - | 1914721..1915347 (+) | 627 | WP_143591818.1 | YcxB family protein | - |
| ABWW34_RS10465 (TthTF19_20640) | comEA | 1915320..1915628 (+) | 309 | WP_041444468.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ABWW34_RS10470 (TthTF19_20650) | comA/comEC | 1915625..1917658 (+) | 2034 | WP_353300373.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| ABWW34_RS10475 (TthTF19_20660) | - | 1917646..1918455 (-) | 810 | WP_014510984.1 | ParB/RepB/Spo0J family partition protein | - |
| ABWW34_RS10480 (TthTF19_20670) | soj | 1918439..1919188 (-) | 750 | WP_353300374.1 | chromosome-partitioning ATPase Soj | - |
| ABWW34_RS10485 (TthTF19_20680) | rsmG | 1919182..1919931 (-) | 750 | WP_353300375.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10933.21 Da Isoelectric Point: 10.3435
>NTDB_id=108690 ABWW34_RS10465 WP_041444468.1 1915320..1915628(+) (comEA) [Thermus thermophilus strain TF19]
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=108690 ABWW34_RS10465 WP_041444468.1 1915320..1915628(+) (comEA) [Thermus thermophilus strain TF19]
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |