Detailed information NTG1086898

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CLC19171_RS01610
• Genome accession: NZ_CP177360
• Coordinates: 285603..286781 (+)
• Length: 392 a.a.
• NCBI ID: WP_257396234.1
• Uniprot ID: -
• Organism: Campylobacter lari subsp. concheus strain RM19171
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 280603..291781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19171_RS01595 (CLC19171_0314)	cysC	281596..282177 (+)	582	WP_257396221.1	adenylyl-sulfate kinase	-
CLC19171_RS01600 (CLC19171_0315)	-	282177..283547 (+)	1371	WP_412097203.1	sulfotransferase family 2 domain-containing protein	-
CLC19171_RS01605 (CLC19171_0316)	-	283579..285606 (+)	2028	WP_257396235.1	capsular polysaccharide biosynthesis protein	-
CLC19171_RS01610 (CLC19171_0317)	kpsS	285603..286781 (+)	1179	WP_257396234.1	capsule biosynthesis protein	Regulator
CLC19171_RS01615 (CLC19171_0318)	-	286778..288289 (-)	1512	WP_412097204.1	hypothetical protein	-
CLC19171_RS01620 (CLC19171_0319)	-	288449..289579 (+)	1131	WP_257396037.1	DUF829 domain-containing protein	-
CLC19171_RS01625 (CLC19171_0320)	-	289589..290962 (+)	1374	WP_257396036.1	cytochrome P450	-
CLC19171_RS01630 (CLC19171_0321)	-	290959..291312 (+)	354	WP_039627957.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46285.86 Da
• Isoelectric Point: 10.1024

>NTDB_id=1086898 CLC19171_RS01610 WP_257396234.1 285603..286781(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19171]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPKAKVYKVNFNGGDFLFYPFNSINYTKSLAELEDFYKKLFEEKQIQV
ILMYNDCRKIHEIAISVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLLSWYFNNCLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKSTEKFIEEVIVSFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1086898 CLC19171_RS01610 WP_257396234.1 285603..286781(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19171]
ATGAATTTAAGTAAGAAATTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGGCCTGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATCCCAAAAGCTAAGGTTTATAAAGTAAATTTTAATGGAGGGGATTTTTTATTTTATCCTTTTA
ATAGTATCAATTATACCAAAAGCTTAGCCGAGCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
ATTTTGATGTATAATGATTGCAGAAAAATTCATGAGATAGCCATCAGTGTAGCCAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGGTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCTACTTTGCCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTTTCAAGTACTTTTAAAAATATG
GCTTTTGCTTCATTTTTATACTGGCTTTTTGCTTTTTTACTTTCTTGGTATTTTAATAATTGTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAACG
AGAAAATTCTTTCTTTAAAACAAAAGTATTTTTTAGCTATTTTGCAAGTGCATAATGATACTCAACTATCCCATCACTAT
AAAAAAAGTACAGAAAAATTTATAGAAGAAGTGATTGTTTCTTTTGCTAATCATGCTAAAGCAAAATCCTATCTAGTTTT
TAAGCATCATCCTATGGATCGTGGTTATAGGGATTACACAAAACTTATAGAAGATTTGAGCTTAAAATACAATGTTGAAG
GTAGAATTTTATATGTACATGATTTGCATTTGCCTACACTTTTGATCAATGCAAGAGGTACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAACAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTACGATATAGAAGGTTTAACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAGTGTAGAGCATATAAGCCTGATGCGGTTTTGCACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.291	100	0.638