Detailed information NTG1086880

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC15629_RS01640
• Genome accession: NZ_CP177359
• Coordinates: 304164..305342 (+)
• Length: 392 a.a.
• NCBI ID: WP_214114834.1
• Uniprot ID: -
• Organism: Campylobacter lari strain RM15629
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 299164..310342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC15629_RS01625 (UPTC15629_0322)	-	299825..300220 (-)	396	WP_214114832.1	sugar 3,4-ketoisomerase	-
UPTC15629_RS01630 (UPTC15629_0323)	-	300346..302109 (+)	1764	WP_257935453.1	hypothetical protein	-
UPTC15629_RS01635 (UPTC15629_0324)	-	302140..304167 (+)	2028	WP_257935454.1	capsular polysaccharide biosynthesis protein	-
UPTC15629_RS01640 (UPTC15629_0325)	kpsS	304164..305342 (+)	1179	WP_214114834.1	capsule biosynthesis protein	Regulator
UPTC15629_RS01645 (UPTC15629_0326)	-	305475..306605 (+)	1131	WP_257935455.1	DUF829 domain-containing protein	-
UPTC15629_RS01650 (UPTC15629_0327)	-	306615..307988 (+)	1374	WP_257935456.1	cytochrome P450	-
UPTC15629_RS01655 (UPTC15629_0328)	-	307985..308338 (+)	354	WP_039627957.1	membrane protein	-
UPTC15629_RS01660 (UPTC15629_0329)	nusA	308335..309426 (-)	1092	WP_257935457.1	transcription termination factor NusA	-
UPTC15629_RS01665 (UPTC15629_0330)	-	309550..309792 (+)	243	WP_039617566.1	HP0268 family nuclease	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46467.09 Da
• Isoelectric Point: 10.2058

>NTDB_id=1086880 UPTC15629_RS01640 WP_214114834.1 304164..305342(+) (kpsS) [Campylobacter lari strain RM15629]
MKLSKKLKKFSGKNVLLLQGPVGAFFRKIATKIPKAKVYKVNFNGGDFFFYPFNSINYTKSLAELEDFYRKLFEEKQIQV
IIMYNDCRKVHEIAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLNQKKFDKDFKFKTFSSTFRNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLIFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNVSLN

Nucleotide

• Length: 1179 bp

>NTDB_id=1086880 UPTC15629_RS01640 WP_214114834.1 304164..305342(+) (kpsS) [Campylobacter lari strain RM15629]
ATGAAATTAAGCAAGAAATTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGACCCGTAGGGGCTTTTTTCCG
TAAAATTGCTACAAAAATTCCAAAAGCCAAGGTTTATAAAGTAAATTTTAATGGGGGAGATTTTTTCTTTTATCCCTTTA
ATAGCATTAATTACACTAAAAGTTTAGCTGAACTTGAAGACTTTTATAGAAAGCTTTTTGAGGAAAAGCAAATTCAAGTT
ATCATTATGTATAATGATTGTAGAAAAGTTCATGAAATCGCCATTAATGTAGCTAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCCACTTTGCCAAGAG
AAAAAGAATTTTATCTAAACCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGCACTTTTAGAAATATG
GCCTTTGCTTCATTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGCTTTGCTCAGTATATAGAAAAAATAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCTCTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAACTATCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATTTAATTTT
TAAACACCATCCCATGGATCGTGGTTATAGGGACTATACTAAACTTATAGAAGATTTGAGTTTAAAATACAATGTCGAGG
GTAGAATTTTATATGTGCACGATTTACACTTACCTACGCTCTTAATCAATGCAAGAGGCACTATAGTTATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGTCCTTTAAAGGTTATGGGTAAAGCCTTTTATGATATAGAAGGCCTAACGTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCCTATAAACCTGATGCGGTTTTGCACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTAAATGGGAATTTTTTCAAAAACGTTAGTTTAAATTGA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.519	100	0.62