Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACLD8G_RS17690 Genome accession   NZ_CP177308
Coordinates   3471590..3472186 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain Kpn-A85     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3466590..3477186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLD8G_RS17675 (ACLD8G_17675) helD 3466798..3468852 (-) 2055 WP_002898429.1 DNA helicase IV -
  ACLD8G_RS17680 (ACLD8G_17680) - 3468977..3469423 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACLD8G_RS17685 (ACLD8G_17685) yccS 3469441..3471576 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACLD8G_RS17690 (ACLD8G_17690) sxy/tfoX 3471590..3472186 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACLD8G_RS17695 (ACLD8G_17695) sulA 3472535..3473044 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACLD8G_RS17700 (ACLD8G_17700) ompA 3473397..3474467 (+) 1071 WP_062954987.1 porin OmpA -
  ACLD8G_RS17705 (ACLD8G_17705) matP 3474599..3475051 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACLD8G_RS17710 (ACLD8G_17710) - 3475237..3476994 (+) 1758 WP_002898401.1 AAA family ATPase -

Sequence


Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1086668 ACLD8G_RS17690 WP_004150836.1 3471590..3472186(-) (sxy/tfoX) [Klebsiella pneumoniae strain Kpn-A85]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1086668 ACLD8G_RS17690 WP_004150836.1 3471590..3472186(-) (sxy/tfoX) [Klebsiella pneumoniae strain Kpn-A85]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51


Multiple sequence alignment