Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACLF6N_RS06705 Genome accession   NZ_CP177279
Coordinates   1264672..1265823 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain KFRI-P74     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1259672..1270823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS06670 (ACLF6N_06670) yjbB 1260344..1261561 (+) 1218 WP_072592593.1 MFS transporter -
  ACLF6N_RS06675 (ACLF6N_06675) yjbC 1261725..1262303 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACLF6N_RS06680 (ACLF6N_06680) spx 1262484..1262879 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACLF6N_RS06685 (ACLF6N_06685) yjbE 1262922..1263578 (-) 657 WP_014479447.1 TerC family protein -
  ACLF6N_RS06690 (ACLF6N_06690) - 1263748..1263888 (+) 141 WP_119122854.1 hypothetical protein -
  ACLF6N_RS06695 (ACLF6N_06695) mecA 1263855..1264511 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  ACLF6N_RS06700 (ACLF6N_06700) - 1264506..1264628 (-) 123 WP_003245684.1 hypothetical protein -
  ACLF6N_RS06705 (ACLF6N_06705) coiA 1264672..1265823 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  ACLF6N_RS06710 (ACLF6N_06710) pepF 1266053..1267882 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  ACLF6N_RS06715 (ACLF6N_06715) - 1267920..1268087 (-) 168 WP_003244944.1 hypothetical protein -
  ACLF6N_RS06720 (ACLF6N_06720) spxH 1268402..1269301 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ACLF6N_RS06725 (ACLF6N_06725) bhbI 1269298..1269696 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACLF6N_RS06730 (ACLF6N_06730) cwlQ 1269951..1270685 (-) 735 WP_250615380.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=1086531 ACLF6N_RS06705 WP_046380934.1 1264672..1265823(+) (coiA) [Bacillus subtilis strain KFRI-P74]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1086531 ACLF6N_RS06705 WP_046380934.1 1264672..1265823(+) (coiA) [Bacillus subtilis strain KFRI-P74]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment