Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACLF6N_RS04985 Genome accession   NZ_CP177279
Coordinates   947299..948093 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain KFRI-P74     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 942299..953093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS04955 (ACLF6N_04955) sxzA 943138..944169 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  ACLF6N_RS04960 (ACLF6N_04960) yfhB 944284..945165 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  ACLF6N_RS04965 (ACLF6N_04965) yfhC 945253..945837 (+) 585 WP_003243940.1 nitroreductase -
  ACLF6N_RS04970 (ACLF6N_04970) yfhD 945876..946067 (-) 192 WP_003233561.1 YfhD family protein -
  ACLF6N_RS04975 (ACLF6N_04975) yfhE 946134..946244 (-) 111 WP_003223230.1 YfhE family protein -
  ACLF6N_RS04980 (ACLF6N_04980) yfhF 946299..947210 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  ACLF6N_RS04985 (ACLF6N_04985) recX 947299..948093 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  ACLF6N_RS04990 (ACLF6N_04990) yfhH 948095..948409 (+) 315 WP_003244592.1 YfhH family protein -
  ACLF6N_RS04995 (ACLF6N_04995) yfhI 948552..949745 (+) 1194 WP_003243500.1 MFS transporter -
  ACLF6N_RS05000 (ACLF6N_05000) sspK 949777..949929 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACLF6N_RS05005 (ACLF6N_05005) yfhJ 950054..950323 (+) 270 WP_003243789.1 YfhJ family protein -
  ACLF6N_RS05010 (ACLF6N_05010) yfhK 950468..950986 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  ACLF6N_RS05015 (ACLF6N_05015) spdL 951071..951403 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  ACLF6N_RS05020 (ACLF6N_05020) ephM 951390..952250 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=1086519 ACLF6N_RS04985 WP_041332784.1 947299..948093(+) (recX) [Bacillus subtilis strain KFRI-P74]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1086519 ACLF6N_RS04985 WP_041332784.1 947299..948093(+) (recX) [Bacillus subtilis strain KFRI-P74]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment