Detailed information NTG1086421

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACLB1C_RS05720
• Genome accession: NZ_CP177244
• Coordinates: 1210422..1211576 (-)
• Length: 384 a.a.
• NCBI ID: WP_412022996.1
• Uniprot ID: -
• Organism: Burkholderia cepacia strain zafu-111
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1205422..1216576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB1C_RS05700 (ACLB1C_05700)	-	1205979..1206362 (+)	384	WP_048246995.1	nuclear transport factor 2 family protein	-
ACLB1C_RS05705 (ACLB1C_05705)	leuA	1206506..1208152 (-)	1647	WP_412022995.1	2-isopropylmalate synthase	-
ACLB1C_RS05710 (ACLB1C_05710)	ybiB	1208533..1209507 (-)	975	WP_343492464.1	DNA-binding protein YbiB	-
ACLB1C_RS05715 (ACLB1C_05715)	maiA	1209702..1210346 (+)	645	WP_193099132.1	maleylacetoacetate isomerase	-
ACLB1C_RS05720 (ACLB1C_05720)	pilA	1210422..1211576 (-)	1155	WP_412022996.1	signal recognition particle-docking protein FtsY	Machinery gene
ACLB1C_RS05725 (ACLB1C_05725)	rsmD	1211793..1212407 (+)	615	WP_412022997.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACLB1C_RS05730 (ACLB1C_05730)	coaD	1212519..1213016 (+)	498	WP_021163047.1	pantetheine-phosphate adenylyltransferase	-
ACLB1C_RS05735 (ACLB1C_05735)	-	1213076..1213342 (+)	267	WP_193099126.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACLB1C_RS05740 (ACLB1C_05740)	hisC	1213427..1214494 (-)	1068	WP_412022998.1	histidinol-phosphate transaminase	-
ACLB1C_RS05745 (ACLB1C_05745)	pth	1214613..1215212 (-)	600	WP_048246979.1	aminoacyl-tRNA hydrolase	-
ACLB1C_RS05750 (ACLB1C_05750)	-	1215321..1215923 (-)	603	WP_048246977.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40998.85 Da
• Isoelectric Point: 4.8095

>NTDB_id=1086421 ACLB1C_RS05720 WP_412022996.1 1210422..1211576(-) (pilA) [Burkholderia cepacia strain zafu-111]
MFSFFKRFKKTQEPDPAESQSADASQADALSDAPAVEAPPAADVPQAPVQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
TQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEELYEELETALLMSDAGVDATEYLLDALREKVRTGRLTDPQQVKS
ALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGSPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALFG

Nucleotide

• Length: 1155 bp

>NTDB_id=1086421 ACLB1C_RS05720 WP_412022996.1 1210422..1211576(-) (pilA) [Burkholderia cepacia strain zafu-111]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGATGCGTCGCAAGC
GGACGCGTTGTCCGATGCGCCCGCGGTCGAGGCCCCGCCCGCGGCCGACGTGCCGCAAGCGCCCGTGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACACCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAAATCGTCCCGCCGCCA
ACGCAGGACGCATCCGCGAAGAAGTCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCCAAGACGGGCTCGAGCATCACCGG
CGTCTTCGTCAACACGAAGATCGACGAGGAGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGACGCGCTGCGCGAAAAGGTGCGCACGGGCCGGCTGACGGACCCGCAGCAGGTGAAGAGC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGTGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCACCTGCAGAGCTTCGATCAAT
CGGTGCTGCTGGCCGCCGGCGACACGTTCCGTGCAGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCACGTGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCTCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCACGGCAACGCCCGGTGCCCGTCTATTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCA
GCGCCGAGGAATTCGCGGACGCGCTGTTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-383)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.237	100	0.578