Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   ACI7Q4_RS09955 Genome accession   NZ_CP177227
Coordinates   2129406..2130041 (+) Length   211 a.a.
NCBI ID   WP_003091163.1    Uniprot ID   A0A0H2ZBU7
Organism   Pseudomonas aeruginosa strain FS26     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2124406..2135041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI7Q4_RS09940 (ACI7Q4_09940) - 2125112..2126356 (+) 1245 WP_003113987.1 lipoprotein-releasing ABC transporter permease subunit -
  ACI7Q4_RS09945 (ACI7Q4_09945) - 2126444..2126977 (-) 534 WP_003091165.1 DUF2062 domain-containing protein -
  ACI7Q4_RS09950 (ACI7Q4_09950) comA 2127108..2129333 (+) 2226 WP_235175956.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACI7Q4_RS09955 (ACI7Q4_09955) exbB 2129406..2130041 (+) 636 WP_003091163.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  ACI7Q4_RS09960 (ACI7Q4_09960) - 2130038..2130478 (+) 441 WP_023517794.1 ExbD/TolR family protein -
  ACI7Q4_RS09965 (ACI7Q4_09965) lpxK 2130478..2131476 (+) 999 WP_023517793.1 tetraacyldisaccharide 4'-kinase -
  ACI7Q4_RS09970 (ACI7Q4_09970) - 2131514..2131699 (+) 186 WP_003091157.1 Trm112 family protein -
  ACI7Q4_RS09975 (ACI7Q4_09975) kdsB 2131699..2132463 (+) 765 WP_023517792.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  ACI7Q4_RS09980 (ACI7Q4_09980) - 2132463..2132921 (+) 459 WP_235175957.1 low molecular weight protein-tyrosine-phosphatase -
  ACI7Q4_RS09985 (ACI7Q4_09985) murB 2132924..2133943 (+) 1020 WP_003124431.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 22890.06 Da        Isoelectric Point: 6.7278

>NTDB_id=1086265 ACI7Q4_RS09955 WP_003091163.1 2129406..2130041(+) (exbB) [Pseudomonas aeruginosa strain FS26]
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA

Nucleotide


Download         Length: 636 bp        

>NTDB_id=1086265 ACI7Q4_RS09955 WP_003091163.1 2129406..2130041(+) (exbB) [Pseudomonas aeruginosa strain FS26]
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGTCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA

Domains

Predicted by InterproScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(66-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZBU7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

81.043

100

0.81

Multiple sequence alignment