Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACJWMD_RS10250 Genome accession   NZ_CP177182
Coordinates   2137137..2137904 (+) Length   255 a.a.
NCBI ID   WP_002887125.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD6060     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2132137..2142904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMD_RS10235 - 2134452..2135135 (-) 684 WP_002883977.1 YoaK family protein -
  ACJWMD_RS10240 rlmH 2135151..2135630 (-) 480 WP_002887123.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACJWMD_RS10245 htrA 2135836..2137071 (+) 1236 WP_002887124.1 S1C family serine protease Regulator
  ACJWMD_RS10250 spo0J 2137137..2137904 (+) 768 WP_002887125.1 ParB/RepB/Spo0J family partition protein Regulator
  ACJWMD_RS10255 ssb 2138051..2138479 (-) 429 WP_002887131.1 single-stranded DNA-binding protein -
  ACJWMD_RS10260 - 2139467..2140384 (-) 918 WP_002887133.1 FRG domain-containing protein -
  ACJWMD_RS10265 - 2140456..2140734 (-) 279 WP_002887136.1 hypothetical protein -
  ACJWMD_RS10270 - 2140717..2141055 (-) 339 Protein_1966 recombinase zinc beta ribbon domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29219.69 Da        Isoelectric Point: 9.7382

>NTDB_id=1086045 ACJWMD_RS10250 WP_002887125.1 2137137..2137904(+) (spo0J) [Streptococcus salivarius strain MRD6060]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
AVTDQDSRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQGLPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1086045 ACJWMD_RS10250 WP_002887125.1 2137137..2137904(+) (spo0J) [Streptococcus salivarius strain MRD6060]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GCTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GCAGTTACAGATCAAGACAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGAAAATCCAGACCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAGAAAAGACTTCAAGGACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(146-195)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58

Multiple sequence alignment