Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACJWMC_RS08360 Genome accession   NZ_CP177181
Coordinates   1805330..1806061 (-) Length   243 a.a.
NCBI ID   WP_002891659.1    Uniprot ID   J7TNC3
Organism   Streptococcus salivarius strain MRD1919     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1800330..1811061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMC_RS08335 - 1801360..1802541 (+) 1182 WP_002891656.1 NAD(P)/FAD-dependent oxidoreductase -
  ACJWMC_RS08345 trmB 1802796..1803437 (-) 642 WP_002891657.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACJWMC_RS08350 ccrZ 1803447..1804238 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  ACJWMC_RS08355 pptB 1804296..1805330 (-) 1035 WP_405183747.1 ABC transporter permease Regulator
  ACJWMC_RS08360 pptA 1805330..1806061 (-) 732 WP_002891659.1 ABC transporter ATP-binding protein Regulator
  ACJWMC_RS08365 - 1806126..1806545 (+) 420 WP_002891660.1 HIT family protein -
  ACJWMC_RS08370 - 1806542..1806841 (+) 300 WP_002891662.1 hypothetical protein -
  ACJWMC_RS08375 - 1807022..1807189 (-) 168 WP_162837453.1 hypothetical protein -
  ACJWMC_RS08380 - 1807766..1808374 (-) 609 WP_002884297.1 DUF4230 domain-containing protein -
  ACJWMC_RS08385 - 1808392..1808517 (-) 126 WP_002884447.1 hypothetical protein -
  ACJWMC_RS08390 - 1808953..1811058 (-) 2106 WP_002891663.1 AAA family ATPase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26875.09 Da        Isoelectric Point: 4.4799

>NTDB_id=1085959 ACJWMC_RS08360 WP_002891659.1 1805330..1806061(-) (pptA) [Streptococcus salivarius strain MRD1919]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQISIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGNLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1085959 ACJWMC_RS08360 WP_002891659.1 1805330..1806061(-) (pptA) [Streptococcus salivarius strain MRD1919]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACCTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTTCCATTGATGGGTTAACCATTCAGCAAGATTCAGCTAGCTATCGTCAGAAGATTGGTTACATCCCT
GAAACCCCAAGCCTCTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTTAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGACCCCTTGGCAATCTCCGACTTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCAGCTGAGAAGATGTGCGACCGCTTCGTGATTTTGCATCATGGACAGGTCTTGGCACAGG
GAAATCTTGAGGAGCTCCGTCAGACTTTTGGCGATGATAGTGCTAGTCTTAATGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TNC3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.354

100

0.984
  pptA Streptococcus thermophilus LMD-9

96.296

100

0.963

Multiple sequence alignment