Detailed information NTG1085939

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACJWMC_RS04840
• Genome accession: NZ_CP177181
• Coordinates: 961475..962356 (+)
• Length: 293 a.a.
• NCBI ID: WP_002890833.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD1919
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 956475..967356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMC_RS04815	-	957004..958428 (+)	1425	WP_002890828.1	DUF4832 domain-containing protein	-
ACJWMC_RS04820	galE	958443..959456 (+)	1014	WP_002890829.1	UDP-glucose 4-epimerase GalE	-
ACJWMC_RS04825	-	959648..959884 (+)	237	WP_002890830.1	DUF1146 family protein	-
ACJWMC_RS04830	murA	959952..961223 (+)	1272	WP_004182615.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACJWMC_RS04835	-	961225..961413 (+)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
ACJWMC_RS04840	endA	961475..962356 (+)	882	WP_002890833.1	DNA/RNA non-specific endonuclease	Machinery gene
ACJWMC_RS04845	-	962432..963082 (-)	651	WP_002890834.1	amino acid ABC transporter permease	-
ACJWMC_RS04850	-	963094..963792 (-)	699	WP_002886251.1	amino acid ABC transporter permease	-
ACJWMC_RS04855	-	963810..964643 (-)	834	WP_037597730.1	transporter substrate-binding domain-containing protein	-
ACJWMC_RS04860	-	964655..965422 (-)	768	WP_002885036.1	amino acid ABC transporter ATP-binding protein	-
ACJWMC_RS04865	-	965609..965809 (-)	201	Protein_913	amino acid ABC transporter permease	-
ACJWMC_RS04870	vicR	965977..966684 (+)	708	WP_002890837.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31507.12 Da
• Isoelectric Point: 10.2036

>NTDB_id=1085939 ACJWMC_RS04840 WP_002890833.1 961475..962356(+) (endA) [Streptococcus salivarius strain MRD1919]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSVKSNGSTSGKSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1085939 ACJWMC_RS04840 WP_002890833.1 961475..962356(+) (endA) [Streptococcus salivarius strain MRD1919]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGGACGAGCAATAAGTTATCGCCTAATAATCCAATCAAGCAGGTAGCCAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGTCAAATCAAACGGCTCAACAAGTGGGAAGTCTACGCCACAAGAGCAGCTCGCTGAGACGGTGATGACT
AGCTCCGTCAAGAGTCAACTAGGAAACTCCTTAGAATGGAATGGGGCAGGGGCTTATATTGTTAATGGTAATAAAACTAA
TCTAAATGCTAAGGTTTCTAGCCAACCCTATGCCAATAATCAAGTCAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTATTAAGTAAAGCAACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCT
GCGGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGATAGAGGTCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCTACGGGACAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACCCTTATTTATGAAGGAGATAACCTCATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCTGATGGCTC
ACTTGAGTTCAATGTTTTTGTTCCAAATGTACAAGAAGGGATTACCCTAGATTATTATTCAGGAAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.429	86.007	0.614
endA	Streptococcus pneumoniae D39	71.429	86.007	0.614
endA	Streptococcus pneumoniae R6	71.429	86.007	0.614
endA	Streptococcus pneumoniae TIGR4	71.429	86.007	0.614