Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ACJWMC_RS02210 Genome accession   NZ_CP177181
Coordinates   422585..423028 (+) Length   147 a.a.
NCBI ID   WP_002890101.1    Uniprot ID   J7TQ97
Organism   Streptococcus salivarius strain MRD1919     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 417585..428028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMC_RS02195 gdhA 418652..420004 (+) 1353 WP_037597452.1 NADP-specific glutamate dehydrogenase -
  ACJWMC_RS02200 - 420291..421832 (+) 1542 WP_080583687.1 hypothetical protein -
  ACJWMC_RS02205 - 421988..422398 (+) 411 WP_002890100.1 peptide deformylase -
  ACJWMC_RS02210 rcrR 422585..423028 (+) 444 WP_002890101.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACJWMC_RS02215 rcrP 423032..424846 (+) 1815 WP_002890102.1 ABC transporter ATP-binding protein Regulator
  ACJWMC_RS02220 rcrQ 424836..426614 (+) 1779 WP_002890103.1 ABC transporter ATP-binding protein Regulator
  ACJWMC_RS02225 - 426722..427345 (+) 624 WP_002890105.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17069.51 Da        Isoelectric Point: 9.6395

>NTDB_id=1085928 ACJWMC_RS02210 WP_002890101.1 422585..423028(+) (rcrR) [Streptococcus salivarius strain MRD1919]
MHGKDPFSDFREIINAMESRVQELGKVHGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKRLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAKDVGHFREAIHEQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=1085928 ACJWMC_RS02210 WP_002890101.1 422585..423028(+) (rcrR) [Streptococcus salivarius strain MRD1919]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAAATCATCAATGCTATGGAATCTCGCGTGCAAGAGTTAGGGAAGGT
CCACGGTGTTGAACATTTAGCCGGCCCACAAGGATTTGCTGTCAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATCGAGAAAAGACTATCTATTTCCAAGTCTGTGGCTAGTAATCTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTGGGTAAAAAGAAGGCCAAAGA
TGTTGGACATTTCCGAGAGGCTATCCATGAACAGTTGTTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCCTTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TQ97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment