Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACJVG6_RS10225 Genome accession   NZ_CP177180
Coordinates   2139167..2139934 (+) Length   255 a.a.
NCBI ID   WP_002887125.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD-KRBY     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2134167..2144934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVG6_RS10210 - 2136482..2137165 (-) 684 WP_002883977.1 YoaK family protein -
  ACJVG6_RS10215 rlmH 2137181..2137660 (-) 480 WP_002887123.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACJVG6_RS10220 htrA 2137866..2139101 (+) 1236 WP_002887124.1 S1C family serine protease Regulator
  ACJVG6_RS10225 spo0J 2139167..2139934 (+) 768 WP_002887125.1 ParB/RepB/Spo0J family partition protein Regulator
  ACJVG6_RS10230 ssb 2140081..2140509 (-) 429 WP_002887131.1 single-stranded DNA-binding protein -
  ACJVG6_RS10235 - 2141497..2142414 (-) 918 WP_002887133.1 FRG domain-containing protein -
  ACJVG6_RS10240 - 2142486..2142764 (-) 279 WP_002887136.1 hypothetical protein -
  ACJVG6_RS10245 - 2142747..2143085 (-) 339 Protein_1958 recombinase zinc beta ribbon domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29219.69 Da        Isoelectric Point: 9.7382

>NTDB_id=1085907 ACJVG6_RS10225 WP_002887125.1 2139167..2139934(+) (spo0J) [Streptococcus salivarius strain MRD-KRBY]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
AVTDQDSRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQGLPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1085907 ACJVG6_RS10225 WP_002887125.1 2139167..2139934(+) (spo0J) [Streptococcus salivarius strain MRD-KRBY]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GCTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GCAGTTACAGATCAAGACAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGAAAATCCAGACCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAGAAAAGACTTCAAGGACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(146-195)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58

Multiple sequence alignment