Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACJVG6_RS08400 Genome accession   NZ_CP177180
Coordinates   1783467..1784543 (-) Length   358 a.a.
NCBI ID   WP_004183329.1    Uniprot ID   A0AB33ZCX3
Organism   Streptococcus salivarius strain MRD-KRBY     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1778467..1789543
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVG6_RS08375 - 1778612..1779394 (+) 783 WP_004183323.1 ABC transporter ATP-binding protein -
  ACJVG6_RS08380 - 1779578..1781644 (-) 2067 WP_004183325.1 cation:proton antiporter -
  ACJVG6_RS08385 - 1781653..1781895 (-) 243 WP_002891697.1 hypothetical protein -
  ACJVG6_RS08390 - 1781892..1782440 (-) 549 WP_004183327.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  ACJVG6_RS08395 - 1782437..1783381 (-) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  ACJVG6_RS08400 sepM 1783467..1784543 (-) 1077 WP_004183329.1 SepM family pheromone-processing serine protease Regulator
  ACJVG6_RS08405 coaD 1784521..1785018 (-) 498 WP_004183331.1 pantetheine-phosphate adenylyltransferase -
  ACJVG6_RS08410 rsmD 1785051..1785650 (-) 600 WP_080562493.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACJVG6_RS08415 trxB 1785741..1786694 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  ACJVG6_RS08420 - 1786727..1786951 (-) 225 WP_002884393.1 DUF4059 family protein -
  ACJVG6_RS08425 - 1787163..1787906 (-) 744 WP_004183334.1 amino acid ABC transporter ATP-binding protein -
  ACJVG6_RS08430 - 1787906..1788652 (-) 747 WP_118058287.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38974.64 Da        Isoelectric Point: 9.2472

>NTDB_id=1085891 ACJVG6_RS08400 WP_004183329.1 1783467..1784543(-) (sepM) [Streptococcus salivarius strain MRD-KRBY]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKSFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1085891 ACJVG6_RS08400 WP_004183329.1 1783467..1784543(-) (sepM) [Streptococcus salivarius strain MRD-KRBY]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTCTTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGGAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGACGATTCTAGCTTTAAGGGTGTCCTCAAT
ATTGCGGATACGGTGACGGCTGTCAATGGCAAGTCTTTTGATAATTCTGCTGACTTGATTAAATACGTTCAAGGACTTAA
GTTGGGTTCAAAGGTCAAGGTCACTTATACGACAGATGATAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAACGGTATTGGTATCGGTTTGACGGATCATACCGAGGTCAAGAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTCGGTGGACCAAGTGCGGGTCTTATGTTTACTCTAGCTATTTACGATCAGGTGTCTGGTCAAGATCTTAAGGCTGG
TCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTTAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTTGTACCAAATAATCCGGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAAACCAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62


Multiple sequence alignment