Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACJVG6_RS05350 Genome accession   NZ_CP177180
Coordinates   1167233..1168045 (-) Length   270 a.a.
NCBI ID   WP_004182610.1    Uniprot ID   A0AAW7PMH8
Organism   Streptococcus salivarius strain MRD-KRBY     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162233..1173045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVG6_RS05320 - 1162431..1163195 (-) 765 Protein_994 nucleoside phosphorylase -
  ACJVG6_RS05325 - 1163200..1164066 (-) 867 WP_004182606.1 GNAT family N-acetyltransferase -
  ACJVG6_RS05330 yidA 1164245..1165051 (+) 807 WP_004182607.1 sugar-phosphatase -
  ACJVG6_RS05335 - 1165051..1166265 (+) 1215 WP_004182608.1 aminoacyltransferase -
  ACJVG6_RS05340 - 1166367..1166643 (-) 277 Protein_998 ISL3 family transposase -
  ACJVG6_RS05345 - 1166815..1167174 (-) 360 WP_004182609.1 YbaN family protein -
  ACJVG6_RS05350 vicX 1167233..1168045 (-) 813 WP_004182610.1 MBL fold metallo-hydrolase Regulator
  ACJVG6_RS05355 vicK 1168051..1169391 (-) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACJVG6_RS05360 vicR 1169384..1170091 (-) 708 WP_002884978.1 response regulator YycF Regulator
  ACJVG6_RS05365 - 1170376..1171143 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  ACJVG6_RS05370 - 1171153..1171986 (+) 834 WP_004182611.1 transporter substrate-binding domain-containing protein -
  ACJVG6_RS05375 - 1172004..1172702 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30094.89 Da        Isoelectric Point: 5.1733

>NTDB_id=1085875 ACJVG6_RS05350 WP_004182610.1 1167233..1168045(-) (vicX) [Streptococcus salivarius strain MRD-KRBY]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANENTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1085875 ACJVG6_RS05350 WP_004182610.1 1167233..1168045(-) (vicX) [Streptococcus salivarius strain MRD-KRBY]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAACACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCGACCAAGCAACGTATCCTCTCTGATCAAGGTCATTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763

Multiple sequence alignment