Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACJVC4_RS08545 Genome accession   NZ_CP177179
Coordinates   1843339..1844415 (-) Length   358 a.a.
NCBI ID   WP_037598428.1    Uniprot ID   A0AB37DC04
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1838339..1849415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS08520 - 1839097..1839417 (+) 321 WP_002891695.1 hypothetical protein -
  ACJVC4_RS08525 - 1839450..1841516 (-) 2067 WP_002891696.1 cation:proton antiporter -
  ACJVC4_RS08530 - 1841525..1841767 (-) 243 WP_002891697.1 hypothetical protein -
  ACJVC4_RS08535 - 1841764..1842312 (-) 549 WP_002891698.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  ACJVC4_RS08540 - 1842309..1843253 (-) 945 WP_002891699.1 TIGR01212 family radical SAM protein -
  ACJVC4_RS08545 sepM 1843339..1844415 (-) 1077 WP_037598428.1 SepM family pheromone-processing serine protease Regulator
  ACJVC4_RS08550 coaD 1844393..1844890 (-) 498 WP_002891701.1 pantetheine-phosphate adenylyltransferase -
  ACJVC4_RS08555 rsmD 1844923..1845519 (-) 597 WP_224111179.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACJVC4_RS08560 trxB 1845613..1846566 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  ACJVC4_RS08565 - 1846599..1846823 (-) 225 WP_002884393.1 DUF4059 family protein -
  ACJVC4_RS08570 - 1847035..1847778 (-) 744 WP_002891704.1 amino acid ABC transporter ATP-binding protein -
  ACJVC4_RS08575 - 1847778..1848524 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39032.72 Da        Isoelectric Point: 9.2472

>NTDB_id=1085822 ACJVC4_RS08545 WP_037598428.1 1843339..1844415(-) (sepM) [Streptococcus salivarius strain MRD-NRLLH]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFSLFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYTTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1085822 ACJVC4_RS08545 WP_037598428.1 1843339..1844415(-) (sepM) [Streptococcus salivarius strain MRD-NRLLH]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGCTAAGTATTTTTACGGT
ACTTTTCCTCCTCTTTTCCCTCTTTTTCCCGCTCAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AGGTCTTGACAGTCGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCCCAAACCAAGGCGACC
TTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCGACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAATCAATTCTACATGGAGACTTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAGAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTCGGTGGACCAAGTGCGGGACTTATGTTTACTTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGCACTATTGAAAAGGATGGAGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGATATTTTCTTTGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCTAAGACTAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623


Multiple sequence alignment