Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACJVC4_RS04855 Genome accession   NZ_CP177179
Coordinates   969843..970655 (+) Length   270 a.a.
NCBI ID   WP_037598119.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 964843..975655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS04825 - 964914..965612 (-) 699 WP_002886251.1 amino acid ABC transporter permease -
  ACJVC4_RS04830 - 965630..966463 (-) 834 WP_037597730.1 transporter substrate-binding domain-containing protein -
  ACJVC4_RS04835 - 966475..967242 (-) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  ACJVC4_RS04840 - 967429..967629 (-) 201 Protein_907 amino acid ABC transporter permease -
  ACJVC4_RS04845 vicR 967797..968504 (+) 708 WP_002890837.1 response regulator YycF Regulator
  ACJVC4_RS04850 vicK 968497..969837 (+) 1341 WP_002890839.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACJVC4_RS04855 vicX 969843..970655 (+) 813 WP_037598119.1 MBL fold metallo-hydrolase Regulator
  ACJVC4_RS04860 - 970715..971074 (+) 360 WP_037597735.1 YbaN family protein -
  ACJVC4_RS04865 - 971126..972340 (-) 1215 WP_002890844.1 aminoacyltransferase -
  ACJVC4_RS04870 yidA 972342..973151 (-) 810 WP_002890845.1 sugar-phosphatase -
  ACJVC4_RS04875 - 973330..974187 (+) 858 WP_002890846.1 GNAT family N-acetyltransferase -
  ACJVC4_RS04880 - 974279..974665 (+) 387 WP_002890847.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30132.00 Da        Isoelectric Point: 5.5388

>NTDB_id=1085803 ACJVC4_RS04855 WP_037598119.1 969843..970655(+) (vicX) [Streptococcus salivarius strain MRD-NRLLH]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDHGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1085803 ACJVC4_RS04855 WP_037598119.1 969843..970655(+) (vicX) [Streptococcus salivarius strain MRD-NRLLH]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAGACTCCAGA
AAAGAAGATTCTTGTGGACGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAAATCGATCGTGATCCGAGTG
ATCTGGATGCTATCTTAGTTACTCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGGAAAAGTTTTGTCATGCTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCTGATGGCTATCTGATTGAGTCCAATCATGATATTGAAATCCTCAGAGCAGGTTCATATCCTTG
GTCAACTAAGCAACGTATCCTCTCTGATCATGGTCACTTGTGTAATGAAGATGGAGCAGATGCTATGATTCGTACCATAG
GTAACAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGCTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAGGTTTATGATACCTCACCAGACACAGCGACACCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.612

99.259

0.77

Multiple sequence alignment