Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACJVC4_RS03950 Genome accession   NZ_CP177179
Coordinates   769337..769630 (+) Length   97 a.a.
NCBI ID   WP_002890617.1    Uniprot ID   J7TXL7
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 764337..774630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS03935 - 765936..767612 (+) 1677 WP_002890614.1 DUF1524 domain-containing protein -
  ACJVC4_RS03940 - 767605..768816 (+) 1212 WP_002890615.1 restriction endonuclease subunit S -
  ACJVC4_RS03945 - 768982..769347 (+) 366 WP_037597648.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ACJVC4_RS03950 HI0659 769337..769630 (+) 294 WP_002890617.1 helix-turn-helix domain-containing protein Machinery gene
  ACJVC4_RS03955 - 769652..771253 (+) 1602 WP_002890618.1 type I restriction-modification system subunit M -
  ACJVC4_RS03960 - 771332..772243 (+) 912 WP_037597651.1 Rpn family recombination-promoting nuclease/putative transposase -
  ACJVC4_RS03965 - 772270..772527 (+) 258 WP_002890620.1 hypothetical protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10778.52 Da        Isoelectric Point: 5.8962

>NTDB_id=1085798 ACJVC4_RS03950 WP_002890617.1 769337..769630(+) (HI0659) [Streptococcus salivarius strain MRD-NRLLH]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGFSQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKL

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1085798 ACJVC4_RS03950 WP_002890617.1 769337..769630(+) (HI0659) [Streptococcus salivarius strain MRD-NRLLH]
ATGAAGAATAGTGCCATCGGCAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACAAAGGAAGAAATCCTGGAAAGTGA
TCTGCGGGTCGCGATTATGACGGAGCTAATCGAGGCTCGGCATGAAAAGGGCTTTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACGGGAAAGACCAGTCCTCAATTGGACACGGTCTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTTGCTGTCGTCCCACTGGAACAAGAAAAGCTCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TXL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment