Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACLB1K_RS16560 Genome accession   NZ_CP177164
Coordinates   3335702..3336298 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain Kpn-A24     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3330702..3341298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLB1K_RS16545 (ACLB1K_16545) helD 3330910..3332964 (-) 2055 WP_004179218.1 DNA helicase IV -
  ACLB1K_RS16550 (ACLB1K_16550) - 3333089..3333535 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACLB1K_RS16555 (ACLB1K_16555) yccS 3333553..3335688 (+) 2136 WP_101970338.1 YccS family putative transporter -
  ACLB1K_RS16560 (ACLB1K_16560) sxy/tfoX 3335702..3336298 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACLB1K_RS16565 (ACLB1K_16565) sulA 3336647..3337156 (+) 510 WP_101970337.1 SOS-induced cell division inhibitor SulA -
  ACLB1K_RS16570 (ACLB1K_16570) ompA 3337509..3338561 (+) 1053 WP_095221503.1 porin OmpA -
  ACLB1K_RS16575 (ACLB1K_16575) matP 3338692..3339144 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACLB1K_RS16580 (ACLB1K_16580) - 3339330..3341087 (+) 1758 WP_151104426.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1085733 ACLB1K_RS16560 WP_004150836.1 3335702..3336298(-) (sxy/tfoX) [Klebsiella pneumoniae strain Kpn-A24]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1085733 ACLB1K_RS16560 WP_004150836.1 3335702..3336298(-) (sxy/tfoX) [Klebsiella pneumoniae strain Kpn-A24]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment