Detailed information NTG1085678

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACLB1F_RS17735
• Genome accession: NZ_CP177161
• Coordinates: 3581680..3582825 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZJ5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576680..3587825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB1F_RS17715 (ACLB1F_17715)	-	3577577..3578005 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
ACLB1F_RS17720 (ACLB1F_17720)	-	3578159..3578671 (+)	513	Protein_3429	bacteriocin biosynthesis protein AlbG	-
ACLB1F_RS17725 (ACLB1F_17725)	-	3578678..3580054 (-)	1377	WP_032875890.1	YncE family protein	-
ACLB1F_RS17730 (ACLB1F_17730)	-	3580094..3581449 (-)	1356	WP_032875887.1	YncE family protein	-
ACLB1F_RS17735 (ACLB1F_17735)	rapF	3581680..3582825 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
ACLB1F_RS17740 (ACLB1F_17740)	-	3582809..3582928 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACLB1F_RS17745 (ACLB1F_17745)	speB	3583051..3583923 (-)	873	WP_032875884.1	agmatinase	-
ACLB1F_RS17750 (ACLB1F_17750)	speE	3583982..3584812 (-)	831	WP_003151052.1	spermidine synthase	-
ACLB1F_RS17755 (ACLB1F_17755)	-	3585012..3587084 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
ACLB1F_RS17760 (ACLB1F_17760)	-	3587109..3587542 (-)	434	Protein_3437	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=1085678 ACLB1F_RS17735 WP_074534220.1 3581680..3582825(+) (rapF) [Bacillus velezensis strain ZJ5]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1085678 ACLB1F_RS17735 WP_074534220.1 3581680..3582825(+) (rapF) [Bacillus velezensis strain ZJ5]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541